Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03998 ATGAGTAGTTTCCAAACTATATCCGTAGCAGTAATACTGTTGGCGCTCACCGCCACCGTCCATTCATGTCCACCGTCAGATAGGGCGGCGCTACTAGCCTTCAAAGCAGCTCTCCATGAACCCCAACTCGCCCAACTCGGCATCTTCACCTCATGGAACGGAGCAGATTGCTGCAACAAATGGTATGGAGTTAGCTGCGACAAAGAATCTCGCCGCGTCGCCGATATCAACCTCCGCGGCGAGTCAGAAGATCCAATCTTCCAAAAAAAACACCACCGTACCGGTTACATGACCGGTTACATCTCACCGGCAATCTGTCACCTCAACCGTCTCTCCAGCTTCACCGTCGCCGATTGGAAAGGTATCTCCGGCGAAATCCCTCGCTGCATATCCTCCCTTCCTTTCCTTCGTATCATTGACCTCATCGGAAACCGCCTCACCGGAACCATCCCCATCGACATCGGAAAACTTCAACGGTTAACCGTTCTTAACATCGCCGATAACGCTATCTCCGGTAACATTCCCCGGTCGCTAACAAATCTTAGAAGCCTGATGCACCTTGATATCCGTAACAATCAGATTTCCGGGCCCATACCTAATGACTTCGGCAGGCTTCCAATGTTGAGCCGGGCTTTACTAAGCGGTAATAAATTATCCGGGCCCATACCCGAGTCAATTTCTCGTATTTACCGTTTAGCAGATCTCGATCTATCAAGAAACCAAGTTTCTGGGCCCATACCTGAGTCCCTAGGTAAAATGGCGGTTTTGTCCACACTTAATTTGGATATGAACAAAATTTCTGGGCCCATTCCAATAAGTCTTTTTAATTCTGGAATAAGTGATTTAAATTTAAGCCGAAATGGTTTAGAAGGTACTATACCTGATGTGTTTGGTGTGAGATCTTATTTCACGGTTTTGGATTTGAGTTATAATCATCTTAAGGGTCCTATACCTAAATCAATGGGTTCTGCTTCTTATATTGGACATTTGGATTTGAGTTATAATCATTTGTGTGGTAAGATTCCTGTTGGAGATCCTTTTGATCATTTGGAAGCTTCTTCTTTTGTTTACAATGATTGTCTTTGTGGGAAGCCACTTAAAGCTTGTGCTAATTAA 1116 0.4516 MSSFQTISVAVILLALTATVHSCPPSDRAALLAFKAALHEPQLAQLGIFTSWNGADCCNKWYGVSCDKESRRVADINLRGESEDPIFQKKHHRTGYMTGYISPAICHLNRLSSFTVADWKGISGEIPRCISSLPFLRIIDLIGNRLTGTIPIDIGKLQRLTVLNIADNAISGNIPRSLTNLRSLMHLDIRNNQISGPIPNDFGRLPMLSRALLSGNKLSGPIPESISRIYRLADLDLSRNQVSGPIPESLGKMAVLSTLNLDMNKISGPIPISLFNSGISDLNLSRNGLEGTIPDVFGVRSYFTVLDLSYNHLKGPIPKSMGSASYIGHLDLSYNHLCGKIPVGDPFDHLEASSFVYNDCLCGKPLKACAN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03998 371 FunFam Nuclear pore complex protein NUP107 25 199 - -
Mepo6g03998 371 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Mepo6g03998 371 Gene3D Ribonuclease Inhibitor 20 93 IPR032675 -
Mepo6g03998 371 Gene3D Ribonuclease Inhibitor 94 371 IPR032675 -
Mepo6g03998 371 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 8 116 - -
Mepo6g03998 371 SUPERFAMILY L domain-like 22 367 - -
Mepo6g03998 371 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 200 278 - -
Mepo6g03998 371 Pfam Leucine rich repeat 159 218 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03998 Mepo-Chr6 52218058 52219938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03998 94 370 Receptor kinase-like Gene Family AT4G08850 32.026 2.24e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03998 - - gmx:100804739 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03998 6 52218058 52219938 Mepo6g03998 6 52218058 52219938 ECH
Mepo6g03998 6 52218058 52219938 Mepo2g02157 2 31142532 31143677 PCT