Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03913 ATGGCGGCGAATTTGACTAATGGAGATCAACATAATGGAGATCAGCAGACAACAACAAAGCAACCTCCCCTGCCATCTCCGTTGCGATTTTCCAAATTCTTTCAGTCCAATATGAGAATTTTGGTGACCGGAGGAGCTGGTTTTATTGGTTCTCACCTTGTTGACAGATTGATGGAAAATGAGAAAAACGAGGTAATTGTAGCTGATAATTACTTCACTGGATGTAAAGACAACCTTAAAAAATGGATTGGTCATCCGAGATTTGAGCTAATTCGTCACGATGTGACAGAGACACTGTTGGTCGAGGTCGATCGGATCTACCATCTTGCCTGCCCTGCTTCTCCAATTTTCTACAAATACAATCCTGTAAAGACAATAAAGACTAATGTAATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTATCCATCCACAACCAGAAACTTACTGGGGAAATGTCAATCCTATTGGAGTTCGGAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGATTAGAAATACGCATTGCTAGAATCTTCAACACATATGGACCACGCATGAATATCGATGATGGGCGTGTTGTCAGCAACTTTATTGCTCAAGCAATTCGTGGTGAGCCCTTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGCCTAATTCGCCTCATGGAAGGAGAAAACACTGGTCCAATCAACATTGGGAACCCAGGCGAGTTTACTATGACTGAACTTGCTGAGAATGTGAAGGAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTAGAGAACACCCCTGATGATCCTCGGCAAAGAAAACCCGACATAACAAAAGCAACAGAATTGCTTGGATGGGAACCAAAGGTCAAGTTGCGGGATGGCCTTCCTCTTATGGAAGATGATTTCCGTCTAAGGCTTGGGGTTCCTAGAAAGAACTAA 1056 0.4318 MAANLTNGDQHNGDQQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKATELLGWEPKVKLRDGLPLMEDDFRLRLGVPRKN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03913 351 MobiDBLite consensus disorder prediction 1 26 - -
Mepo6g03913 351 Pfam GDP-mannose 4,6 dehydratase 41 335 IPR016040 -
Mepo6g03913 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 342 IPR036291 -
Mepo6g03913 351 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 24 345 IPR044516 GO:0042732|GO:0048040|GO:0070403
Mepo6g03913 351 CDD UGD_SDR_e 38 342 - -
Mepo6g03913 351 Gene3D - 37 344 - -
Mepo6g03913 351 FunFam UDP-glucuronic acid decarboxylase 6 37 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03913 Mepo-Chr6 51420632 51426171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03913 35 334 Miscellaneous Gene Families AT1G02000 24.179 3.30e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03913 K08678 - gmx:100790835 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03913 6 51420632 51426171 Mepo6g03913 6 51420632 51426171 ECH
Mepo6g03913 6 51420632 51426171 Mepo2g01764 2 25901440 25904549 PCT
Mepo2g02037 2 29666895 29671583 Mepo6g03913 6 51420632 51426171 PCT