Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03510 ATGGCGACACTTGATTCCGACGTTCCTATGGTTCCCGCCGGCGAAACCTCCTGCTGCGCTCACGGTGGTCCGTCTTCCAAGAAGCCGAAGCGCTTCGAGATCAAGAAATGGAATGCTGTTTCTCTCTGGGCTTGGGATATTGTTGTTGATAATTGTGCTATCTGCAGGAATCATATCATGGATCTCTGTATTGAGTGTCAGGCGAATCAGGCTAGCGCCACGAGCGAGGAATGCACAGTTGCTTGGGGGGTTTGTAACCATGCTTTTCACTTCCATTGCATAAGCAGATGGCTGAAAACCCGTCAAGTTTGTCCTCTAGACAACAGTGAGTGGGAATTTCAGAAATACGGCCACTAG 357 0.4958 MATLDSDVPMVPAGETSCCAHGGPSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03510 118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 118 IPR013083 -
Mepo6g03510 118 ProSiteProfiles Zinc finger RING-type profile. 63 108 IPR001841 -
Mepo6g03510 118 PANTHER RING BOX 31 117 - -
Mepo6g03510 118 Pfam RING-H2 zinc finger domain 50 108 IPR024766 GO:0008270
Mepo6g03510 118 CDD mRING-H2-C3H2C2D_RBX1 50 111 - -
Mepo6g03510 118 FunFam E3 ubiquitin-protein ligase RBX1 19 118 - -
Mepo6g03510 118 SUPERFAMILY RING/U-box 30 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03510 Mepo-Chr6 47318472 47322223 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03510 K03868 - gmx:100789570 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03510 6 47318472 47322223 Mepo2g01494 2 22248731 22252606 PCT