Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03438 ATGACTAAAGAATGTGACTTCCATGAAGACGAACGCCGCCAACTCATCCGTCGCATATTCGCCGCAATCCTCAGCTTCATAATCCTCATACTCTTCGTAATCTTCCTTATTTGGATCATCCTCCGACCAACCAAACCCCGTTTCATCCTCCAAGATGCAACTGTCTTCGCCTTCAACCTCTCCTCCACCGGCGAAACACCATCCTCAACCACCCCTACACCCAACACCATAACCCTCACAATTCAAGTCACTCTTTCATCCTTCAATCCAAACTCAAAAATAGGCATTTACTATCACAAACTTGACGCATACGCTTCCTATAGAGGACAACAAATCTCTTTAGCCACTGAACTTCCACAAACTTATCAAGGCCACCGCGACGTCACGGTTTGGTCACCGATACTATATGGCGCGGCTGTTCCGGTTTCGCCTTACTTGTCGGAGATTCTAAGGCAAGATCAAACTTCAGGAGGAGTGTTGGTCAACGTTAAAGTCAACGGTAGGGTTAAGTGGAAAGTGGGGACTTGGGTTTCTGGAAGGTACCATATTGATGTGAATTGTCCGGCGTTTATAAAGGTCGCCGGTGATAAGGGTGATGACGGGTTCGGAGTTTCTGCTCCGGCGGTGAAGTTTCAGTTTTTGCAAAGTTGTGTTGTTGATGTTTAA 666 0.467 MTKECDFHEDERRQLIRRIFAAILSFIILILFVIFLIWIILRPTKPRFILQDATVFAFNLSSTGETPSSTTPTPNTITLTIQVTLSSFNPNSKIGIYYHKLDAYASYRGQQISLATELPQTYQGHRDVTVWSPILYGAAVPVSPYLSEILRQDQTSGGVLVNVKVNGRVKWKVGTWVSGRYHIDVNCPAFIKVAGDKGDDGFGVSAPAVKFQFLQSCVVDV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03438 221 PANTHER OS05G0367900 PROTEIN 17 201 IPR044839 GO:0098542
Mepo6g03438 221 Pfam Late embryogenesis abundant protein 84 187 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03438 Mepo-Chr6 46516239 46517286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03438 13 187 EF-hand Containing Proteins AT5G21130 25.568 4.60e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03438 - - pvu:PHAVU_005G120900g 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03438 6 46516239 46517286 Mepo6g03438 6 46516239 46517286 ECH
Mepo6g03438 6 46516239 46517286 Mepo2g01620 2 23995127 23996060 PCT