LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g03414	ATGACAGAAGTTCTCCATTCTCCACCTCATTTTATTTCATCACAAAGAACCACATCACCAACACCTTCAACTTCAACTTCAACTTCTTCTTCTCCTCTCTCTTCGTTCTCTTGCCATGCCATTTTTCAACCTCCTTCACAACCACATTTTCCACTTTTTGAGCTACTAGTAACTCTTTTCAGAAAATCATTATTTCCTTTCAAGAGTAGTGGCAACAAAGACCTTTGCAACATGGACATAAGCCCTCCAACTAACGTGCGTCATGTCGCGCACGTTACTTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGATGAGTTTGAACCTGATTTTCCCAGAAGGCCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCTTATGATTCAAGAGGGAACAGTGTGCCAACAATTCTTCTGTTAATGCAAAGGCATCTGTATGTTCAAGAAGGGTTGCAGGTAGAGGGGATTTTCAGAATTAATGCAGACAATAGTCAAGAGGAACATGTTAGGAACCAATTGAACTTAGGATTGGTTCCTGAAGACATTGATGTACATTGTCTGGCAGGACTAATTAAGGCTTGGTTTCGGGAACTTCCTAGCGGCGTTCTGGACTCATTATCACAAGAGCAGGTAATGCAATGCCAAACTGAGGAAGACTGTATTGAACTAGTGAGGCATCTACCTCATGCTGAAGCTGCACTCTTGGATTGGGCCATCAATCTAATGGCTGATGTAGTCGAACACGAAAATCTCAATAAGATGAACGCGCGCAACATTGCCATGGTTTTCGCGCCAAACATGACTCAGATGGCAGATCCATTCACTGCATTGATGTACGCAGTTCAAGTGATGAATTTCTTGAAGATGCTTATATTAAGGACGCTACGAGAAAGAAAGGATTCTATCGTCGAATCTAATCCAAGATTGAATTTAGAACCTTCTGATGAGAATGGACACCGTAGACTTTTTGAGTCATTTCAGAAAGAAGATACTGCAGAAGCAGACAATGAAGAGGCTAAAGAAATTTTTGTTTCAGAAAAAACTGTCTTAGAATGTACACCCGAATCACTCGAAAAAAACTCCTCAACTGAAAGAGAATCTGGCAGTTTGATAAGCACTTCTGAGAATCCAATTTGCAATGAGGAATTGTATTGTGAGTTTCCTCCGAAAAGAAACATGGGGAAGAACAACAAGTCTGGTCAATCAAGTAGTTCAAATGCTAGAAAAGGGTCCAAAAAGACAAGAGGACAACAACCTGTGATCAATGGAAAAGTGTCGGCCGAGAAAAAGGGAATGAGGACTTTGAGCAGCACAGATACAAGATCAGACCGAGTCGAAGCTTGGCGGTGA	1371	0.4136	MTEVLHSPPHFISSQRTTSPTPSTSTSTSSSPLSSFSCHAIFQPPSQPHFPLFELLVTLFRKSLFPFKSSGNKDLCNMDISPPTNVRHVAHVTFDRFNGFLGLPDEFEPDFPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQEGLQVEGIFRINADNSQEEHVRNQLNLGLVPEDIDVHCLAGLIKAWFRELPSGVLDSLSQEQVMQCQTEEDCIELVRHLPHAEAALLDWAINLMADVVEHENLNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLKMLILRTLRERKDSIVESNPRLNLEPSDENGHRRLFESFQKEDTAEADNEEAKEIFVSEKTVLECTPESLEKNSSTERESGSLISTSENPICNEELYCEFPPKRNMGKNNKSGQSSSSNARKGSKKTRGQQPVINGKVSAEKKGMRTLSSTDTRSDRVEAWR	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g03414	456	CDD	RhoGAP	142	298	-	-
	Mepo6g03414	456	SMART	PBD_5	80	114	IPR000095	-
	Mepo6g03414	456	MobiDBLite	consensus disorder prediction	441	456	-	-
	Mepo6g03414	456	Gene3D	Rho GTPase activation protein	113	310	IPR008936	-
	Mepo6g03414	456	ProSiteProfiles	CRIB domain profile.	80	93	IPR000095	-
	Mepo6g03414	456	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	125	310	IPR000198	GO:0007165
	Mepo6g03414	456	FunFam	Rho GTPase-activating protein 5	110	303	-	-
	Mepo6g03414	456	SUPERFAMILY	GTPase activation domain, GAP	120	299	IPR008936	-
	Mepo6g03414	456	MobiDBLite	consensus disorder prediction	401	428	-	-
	Mepo6g03414	456	PANTHER	MKIAA1688 PROTEIN	1	422	IPR044785	GO:0005096
	Mepo6g03414	456	Pfam	P21-Rho-binding domain	79	112	IPR000095	-
	Mepo6g03414	456	SMART	RhoGAP_3	139	302	IPR000198	GO:0007165
	Mepo6g03414	456	MobiDBLite	consensus disorder prediction	396	456	-	-
	Mepo6g03414	456	MobiDBLite	consensus disorder prediction	360	380	-	-
	Mepo6g03414	456	Pfam	RhoGAP domain	142	276	IPR000198	GO:0007165
	Mepo6g03414	456	CDD	CRIB	78	118	-	-
	Mepo6g03414	456	MobiDBLite	consensus disorder prediction	1	30	-	-
	Mepo6g03414	456	Gene3D	CRIB domain	76	110	IPR036936	-
	Mepo6g03414	456	MobiDBLite	consensus disorder prediction	7	30	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g03414	Mepo-Chr6	46354843	46357991	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g03414	-		K20642	gmx:100784019	555.058

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo6g03414	6	46354843	46357991	Mepo2g01671	2	24582693	24585944	PCT