Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03391 ATGGATCAAGAGGTAGGAAGCATACTCGAGTTTCTTGAGGACAAGACCATATTGGTTATTGGTGCCACTGGTTTTCTTGCAAAAATATTTTTGGAGAAGGTATTGAGAGTTCAACCAAATGTCAAAAAGCTTTTTCTTCTTTTAAGAGCCTCTGATGACAAATCTGCAGCTAGTCGCTTACAAAATGAGATTTTAGCAAAGGACTTGTTTAACTTGCTAAATGAAAAATTGGGTACAAATTTCAAGTCTTTTATTTCGGAAAAGTTGACTGTGGTGCCTGGGGATATCACTTTGGATGACTTGGGTTTGAAGGATTCCATTTTAAGGGAAGATATTTCCTCTCAAACTGATGTTATTATTAATTTGGCTGCAACTACTAACTTTGATGAAAGGTACGATATAGCATTGGATCTAAATACATTTGGAGTGAAACATATCATGAGCTTTGCAAAACAATGTATCAGACTCAAAGTCCTTGTCCATGTATCAACAGCTTATGTATGCGGTGAAAAAAGTGGACTCATACTAGAAAGTCCCTATCTCTTGGGCGATTCATTAAACGGTGTAGCTGGATTAGACATAAATGCCGAAAAGAAATTAGTAACCGAAAGATTAGGTGAGCTACAAGAGCAAGGAGCCACGGAGCATGAAATTAAAGTGGCCATGAAGGACCTAGGTATTACAAGGGCCAATGTGTATGGCTGGCCAAACACATACGTGTTTACAAAGGCACTTGCGGAAATGCTTGTGGAGCGATTGAAAGAAAACTTATCTGTTGTTATTCTACGTCCTGCCATTGTCACAAGTACATTAAGAGAACCTTTCCCTGGTTGGGTTGAGGGTGTCAGAACCATTGACAGCTTAGGTGTTGCTTATGGGAAAGGAAAACTAACATGTTTTCTTGGAGATCTCGACGGTGTTGTTGATGCGATACCAGCTGACATGGTGGTCAATGCAATGTTAGTGGCTATGGTGGCTCATGCAAATCAACCTAGTGATAGGGTATATCATGTAGGTTCCTCTGTTAGAAATCCATTGAGATATCAAAATCTTCATGACTATGCATTAGGATATTTCAAGGCAAAACCATGGATAAACAAAGATGGAACAACTGTTAAGGTTGGCAAAATAACCGTATTAACCAACATGGCAAGCTTCCAAAGATACATATTCATTCGCTACCTTCTTCCTTTAAAGGGACTCAAATTGGCCAATGCAGCACTTTGCCAGTATTTTCAAGGAACTTATCTTGAGCTCAATAGGAAGATCCAATTTGTGATGCGGTTGGTGGAACTTTACAGACCTTATTTATTCTTCAAGGGCATATTCGATGATTTAAACACAGAGAAGTTGCGGATGGCTGCAAGACAAAGTCGAACAGAGATAGATTTATTTTACTTCGACCCAAAAGAGATAGATTGGGAAGATTACTTTATGAACACTCATATCCCTGGTTTAGTCAAGTATATTTTTAAGTGA 1479 0.3867 MDQEVGSILEFLEDKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNEILAKDLFNLLNEKLGTNFKSFISEKLTVVPGDITLDDLGLKDSILREDISSQTDVIINLAATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLGDSLNGVAGLDINAEKKLVTERLGELQEQGATEHEIKVAMKDLGITRANVYGWPNTYVFTKALAEMLVERLKENLSVVILRPAIVTSTLREPFPGWVEGVRTIDSLGVAYGKGKLTCFLGDLDGVVDAIPADMVVNAMLVAMVAHANQPSDRVYHVGSSVRNPLRYQNLHDYALGYFKAKPWINKDGTTVKVGKITVLTNMASFQRYIFIRYLLPLKGLKLANAALCQYFQGTYLELNRKIQFVMRLVELYRPYLFFKGIFDDLNTEKLRMAARQSRTEIDLFYFDPKEIDWEDYFMNTHIPGLVKYIFK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03391 492 Gene3D - 10 376 - -
Mepo6g03391 492 Pfam Male sterility protein 394 492 IPR033640 -
Mepo6g03391 492 CDD FAR_C 392 491 IPR033640 -
Mepo6g03391 492 CDD FAR-N_SDR_e 15 363 - -
Mepo6g03391 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 341 IPR036291 -
Mepo6g03391 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 8 492 IPR026055 GO:0080019
Mepo6g03391 492 Pfam Male sterility protein 21 320 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03391 Mepo-Chr6 46123549 46132456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03391 115 491 Acyl Lipid Metabolism Gene Families AT4G33790 60.477 5.89e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03391 K13356 - gmx:100788680 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03391 6 46123549 46132456 Mepo6g03391 6 46123549 46132456 ECH
Mepo6g03391 6 46123549 46132456 Mepo2g01707 2 24982343 24999277 PCT