Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03390 ATGGAATTGGGAAGCATATTGCACTTTCTTGAGGGCAGAACAATTTTAGTCACTGGTGCCACTGGCTTCCTCGCAAAAATTTTTGTTGAAAAGATTTTGAGAGTTCAACCAAATGTGAAGAAACTTTATCTTCTTCTAAGAGCTAAGGATTCTGAATCTGCTGCCCAACGTTTCAGCACTGAGATAATAGGGAAGGACTTGTTTAAATTGCTGAAGGAAAATCAGGGTCCAAGGTTCAACTCCTTTGTCTCTGAAAAGTTGACTTTAGTGCCTGGAGACATTTCTAAAGAAGGCTTGAATTTGAAGGAATCCATTCTAGAAGAGGAGATTTGCAATCAAACAGATGTTATAGTTAACTTGGCTGCAACAACGAAATTTGATGAAAGATACGATGTTGCATTGGGTATAAATACATTAGGAGTCAGGCATGTTTTGAGCTTTGCTAAAAAGTGTACTCAACTAAAGGTGCTTGTCCACGTTTCAACAGCTTATGTGTGTGGTGAGGGAGGAGGACTCATATTAGAGGATCCTCATCGCTACGGTGTGTCACTAAATGGAGTTCCAGGACTTGACATTGATATGGAAAAGAAATTAGTGGAGGGGAAATTCAATCAATTTCTGGCACAGGGAGCAACTGAACATGATATTGAAGTGGCCATGAAGGACTTAGGCATGGAAAGAGCTACTAAATATGGATGGCCAAACACATATGTGTTTACAAAAGCAATGGGAGAAATGCTTGTAGAAACTTTCAAGGATAACATGTCTGTTGTTATTGTTCGTCCCACCATTGTTACTAGCACTTATAGAGAACCATTCCCTGGATGGGTTGAAGGGTTAAGAACCATAGACAGTATAGTCGTTGCTTATGGTAAAGGAAAATTAACAAGCTTCATGGCTGACCTAGACGCAGTTTTCGATGTGATACCAGCAGATATGGTGGTAAATGCAATTATAGTAGCTATGATGGCTCATGCAAATCAACCTTGTGATAACATCATATATCATGTTGGTTCCTCTATTAGAAATCCAATTACGTACCGTACTTTCAGAGACTATAACCTTAGATATTTCACCAAAAAACCATTGATGAACAAGGATGGAAAATCGATTAAGGTTGGCAATATTACTGTGTTTAGCAACATAGCTAGCTTCCGGAGATACATGTTCATATGCTACATGCTTCCTTTAAAGGGACTAGAGGTCGCAAATTCAATTTTGTGCCAATATTTTCGGGGAATATATGTTGACCTAAACCGGAAAATCAGCACAGTTATGCGGTTGGTTGATCTTTACCTGCCTTACTTGTTCTTCAATGGCATATTTGATGATATGAATACAGAAAAGTTGCTATTAGCCGTAAAAGAAGAAGGTGTAGAAATGAATTTGTTTTACTTTGATCCCAAAATTATTGATTGGGAAGATTACTTCATGAATATCCACATCCCTGGTATCTTCAAGTATGCATTAAAGTTTTGA 1479 0.3813 MELGSILHFLEGRTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAKDSESAAQRFSTEIIGKDLFKLLKENQGPRFNSFVSEKLTLVPGDISKEGLNLKESILEEEICNQTDVIVNLAATTKFDERYDVALGINTLGVRHVLSFAKKCTQLKVLVHVSTAYVCGEGGGLILEDPHRYGVSLNGVPGLDIDMEKKLVEGKFNQFLAQGATEHDIEVAMKDLGMERATKYGWPNTYVFTKAMGEMLVETFKDNMSVVIVRPTIVTSTYREPFPGWVEGLRTIDSIVVAYGKGKLTSFMADLDAVFDVIPADMVVNAIIVAMMAHANQPCDNIIYHVGSSIRNPITYRTFRDYNLRYFTKKPLMNKDGKSIKVGNITVFSNIASFRRYMFICYMLPLKGLEVANSILCQYFRGIYVDLNRKISTVMRLVDLYLPYLFFNGIFDDMNTEKLLLAVKEEGVEMNLFYFDPKIIDWEDYFMNIHIPGIFKYALKF 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03390 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 357 IPR036291 -
Mepo6g03390 492 Gene3D - 8 373 - -
Mepo6g03390 492 Pfam Male sterility protein 17 318 IPR013120 -
Mepo6g03390 492 Pfam Male sterility protein 393 491 IPR033640 -
Mepo6g03390 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 491 IPR026055 GO:0080019
Mepo6g03390 492 CDD FAR-N_SDR_e 13 362 - -
Mepo6g03390 492 CDD FAR_C 391 490 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03390 Mepo-Chr6 46110353 46116216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03390 110 488 Acyl Lipid Metabolism Gene Families AT4G33790 60.950 1.97e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03390 K13356 - gmx:100789566 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03390 6 46110353 46116216 Mepo6g03390 6 46110353 46116216 ECH
Mepo6g03390 6 46110353 46116216 Mepo2g01710 2 25071019 25078020 PCT