Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03343 ATGGCTGTTGCTGGAGTGCACAATGCAGCTGTGTTGGAGACTAATTTCCTGAGGGAGTCCCATTCTCGGTCACCACGGAGGCAAGAAGATGGAGGAAGGGTAGGTGGACGGTCATCTTCACTTTTGCAAATGTGGCGAGAGATTGAAGATGAGCACATGGTGAGGCAGGTTCAAGGAAGATCTGATGAAGTATTAGTTCAACAAAGGAATGAGGGGTTGGTTGCAGACCCATCACAGGAAGATGCAGGTTTAGGGGAGAATGAATCTGAAACATGGTCACAGTCGCAAAGTCAGAATGGGTCTCAATATGAACAGGATCAGGAGGAGTTGAACAGTTCTAATCGTGAAAACTCCGCTGATATTGGGGATGTTGGGAGGGAAAGAGTGAGGAAAATCTTCAGGGGATGGATGAGTAATGGTGGTTCTAGGGATCGTGCATCAAATATTAGTCGAGGGAATAGTGGTTCGAGGAGTGAATTGCTTGGGGGAACTGACCAGGAAAGAGTTAGTATCGTAAGGGAATGGGTAGAGACGAGTAGCCGGCTGCGAGGTGTTTCTGTTGGGGAAAATAGGGAAGAACAACCTGCTGAATTTGGTAACCCCAATGAAGGCCAAAGTGAGCATATATCACGAAGAAGAATCCGTAAATTACGTGGCCGGCAGGTTTTGCTTGATATGGTTAAGAAGGCTGTGATGGAGAGGCAAAGAGAGGTTCAGGAATTGTTGGAACGTCGGGCTGTATCTCATTTTCCCCATCGCAATCGCATTCAGGCCTTGCTTAGAGGCAGGTTTTTGAGAAATGATAGACCCATTGATAATAACCGGTCCACTTCCATTGCAGAAAGTGAATTAGGCTTACTGAGACAAAAACAGACTGTATCATGTCTAAGGGAAGGATTTTCTTTTAGAAAGGACAATTTAGGTTATGGTCAAGCAGCAAGCAACCTATCTGATACCTCATCTGACAGTGATATTGATGTCGATAGAATTGAACAAACTGGAGCTACAAGTTCACAAGTAGTCACCTCTGTACATTCCGAACAATCAAAGCCTAATAATAAGGGAAGTGATAGACTTGGGATGTCATGTGCTCATGATGAAGAAGAAGAAACAGGAATTTGTGAGTCGTCTTCCAATATCAGTGTTGAAAGAAGAGATGGCAATGCACAAAATGTTGACACAATACCATCTGAAGATACCGGTAACAACCTTACCCAACAAAGCTTGCAAATTGAAGTTTCGGAGCATAGCAATCTGCAAGAACAAGAACAAGAAGCAAGTGATATACATAATGAGGAGTCTCTGCGGGGTGATATAACCGGTGAACAAAGCAATTTATCAAATCACAACAATCGTGAAGAGGGCAGTATCATTGATAATGTAGATTTGATTGAATCTGTTGCTCTAGAAAGACAGCAACATGAAGAAATTATTATTGAAAATGAAGGAAGTGGCTGGCATCAAACTAACGTTGAGTGGAGAGATAGTACTCAGCAAAGTGTGGATGATAATCAGCTCAGCAGTACATCAAATGAATGGCCCCAAGACATCTTGGGAAATGATGATGGAGAAAGTTCTCGTCTGCAAGAGCAAGTAGCAGCCTCTGAAGTGTGGCAAGAAGATGGCAGCTTTCAAGAAGCTGTGGAAATTTGGTTGGGAGGACCTTCTGATAATGGAGCAGCTCCAGTTGGTAGAATTCATGGATTCTATTTTCCAGAAGATGACAATGTGTACAGTGTTGAACTCAGGGAACTGCTAAGTAGGAGAAGTGTCTCAAACCTCCTACGCAGCAGTTTTCGTGAAAGTCTTGACCAGCTGATACAATCATATGTTGAAAGGCAAGGTCATGCTCACGTTGAGTGGGAGGAGCTGCAAGAAACAACCCCGTCTTCTTCCTCAACAGAACAAGACCTGGAGCAGCAGAGAAGGGATCAGATTGTTGATACGGAGGACATTGTCAATAATTCACTTAACCTGCCTTTACCACCACCTCCTCCCCCTCTGCCTCTATGGGATCGACACACACGTCATGACAATTGGACACAGCAGAATGGCATAAATAATCAGCGCCGAGGAACTGTGAATTCATTTGCAGGACACAACCGATTTCCTTTAGCTGATGATTGGGATAATATTAGTGACTTGAGAATTGACATGGTTAGGCTACAGCAAAGGATGAATAATATGCAGAGAATGCTAGAGGCTTGTATGGATATGCAGCTTGAGTTGCAACGCTCAATAAGACAAGAAGTCTCTGCAGCCCTTAATCGCTCAACTGGTTCATCAGGAATACATGACCATGTTTCGCCAGACGAATCTAAATGGGAATGTGTGCGGAAAGGGCTTTGCTGTATATGCTGCGAAGGCAATATTGATTGTTTGTTGTACAGATGTGGGCACATGTGCACATGCTCCAAATGTGCAAATCAATTGCTTGATAGTAGAAAAAAGTGTCCAATGTGTCGAGCACCAGTGGTGGAAGTGGTTCGTGCTTATTCTATATAA 2505 0.4371 MAVAGVHNAAVLETNFLRESHSRSPRRQEDGGRVGGRSSSLLQMWREIEDEHMVRQVQGRSDEVLVQQRNEGLVADPSQEDAGLGENESETWSQSQSQNGSQYEQDQEELNSSNRENSADIGDVGRERVRKIFRGWMSNGGSRDRASNISRGNSGSRSELLGGTDQERVSIVREWVETSSRLRGVSVGENREEQPAEFGNPNEGQSEHISRRRIRKLRGRQVLLDMVKKAVMERQREVQELLERRAVSHFPHRNRIQALLRGRFLRNDRPIDNNRSTSIAESELGLLRQKQTVSCLREGFSFRKDNLGYGQAASNLSDTSSDSDIDVDRIEQTGATSSQVVTSVHSEQSKPNNKGSDRLGMSCAHDEEEETGICESSSNISVERRDGNAQNVDTIPSEDTGNNLTQQSLQIEVSEHSNLQEQEQEASDIHNEESLRGDITGEQSNLSNHNNREEGSIIDNVDLIESVALERQQHEEIIIENEGSGWHQTNVEWRDSTQQSVDDNQLSSTSNEWPQDILGNDDGESSRLQEQVAASEVWQEDGSFQEAVEIWLGGPSDNGAAPVGRIHGFYFPEDDNVYSVELRELLSRRSVSNLLRSSFRESLDQLIQSYVERQGHAHVEWEELQETTPSSSSTEQDLEQQRRDQIVDTEDIVNNSLNLPLPPPPPPLPLWDRHTRHDNWTQQNGINNQRRGTVNSFAGHNRFPLADDWDNISDLRIDMVRLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGIHDHVSPDESKWECVRKGLCCICCEGNIDCLLYRCGHMCTCSKCANQLLDSRKKCPMCRAPVVEVVRAYSI 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03343 834 CDD mRING-HC-C3HC5_NEU1 783 832 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 374 402 - -
Mepo6g03343 834 Coils Coil 712 739 - -
Mepo6g03343 834 Pfam Zinc finger, C3HC4 type (RING finger) 780 827 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 17 38 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 71 123 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 415 434 - -
Mepo6g03343 834 ProSiteProfiles Zinc finger RING-type profile. 783 822 IPR001841 -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 186 212 - -
Mepo6g03343 834 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 834 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 137 163 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 84 119 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 141 163 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 334 356 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 19 33 - -
Mepo6g03343 834 Coils Coil 224 244 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 495 524 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 621 642 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 334 402 - -
Mepo6g03343 834 MobiDBLite consensus disorder prediction 418 434 - -
Mepo6g03343 834 SUPERFAMILY RING/U-box 782 828 - -
Mepo6g03343 834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 763 833 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03343 Mepo-Chr6 45390848 45397281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03343 - - gmx:100803851 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03343 6 45390848 45397281 Mepo6g03343 6 45390848 45397281 ECH
Mepo6g03343 6 45390848 45397281 Mepo2g01784 2 26225728 26232516 PCT