Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03153 ATGAACAAACCCATTCTCATTTCTCAAGAAGACCAACACCAACAACAACACCAACACCAACACCAACAACTAGACCAACAAGATTTCTTCTACGAATCACACGACCGTTTACTCTCTCTCTCCTCTTCCTGTTCTTGTTCCAACTCCAACTCTGACCAAGAAGACGAAGACCAAGAAAACAACAACAATAATTGTAATTACAATTTTGCCCTTAACAGTTACGACATATGGATCTCTCAACCTTCTTCTGTTTCAGAACGTCGTACTCGTCTTCTTCAAACTATTGGTCTTTCTTCCGATTTTGCCCTTTCACGTGGTAACCCAATCCCACCTTACAATGCCATATTCCGATCCAAATCTGACGGTCATAACAACAATTCTAATAACTCCTGTTTTATCTCTTCTACTGTAAATGTAAATAGTTCTATTCCCGGTAATTCTGGCGGATCCCCTGCTAAACCTCCGTCTGGAAAGAATTCTTCTAGAAGAAGTCATTCCGGTGTTGATTTCTTGCCGGGGAATTCTTCTACTTTGCCGGACACGGTTGAGATTTCCTGTGAAGCTGTGGTTTCTAGAGAGATAGAATGCAGTGAAATTGAAAAAGGTGAAGAACAAGCTTGTACTATTAGAGATCTTGATAATGGAAAAGAGTTTGTTGTGAAAGAGGTTAGAGAAGATGGAATGTGGAATAAAGTGAAGGAGGTTAGTACTGGGAGACAGTTGACTATGGAGGAATTTGAGATGACGGTTGGTCAATCGCCGATTGTGCAGGAGCTTATGCGGAGGCAGAATCATGAGGAGACTGGCGATGTAGCTGGTGGTGGTGTTGGAAATGGGAGTAATGGTCATGGAGGTTGTTCTAAGGGGAAGAAGAAAGGAGGGAGTTGGTTGAAGAGTATCAAGAGTGTTGCTAGTTCAATGGCAGGTCATAAGGAGAGGAGGAGTAGTGATGAGAGAGATACTTCGTCGGAGAAAGGCGGGAGGAGGTCGAGCTCGGCTACGGATGATAGCCAAGATGGTTCATTTCATGGACCTGAGAGGGTGAGAGTGAGACAATATGGGAAATCATGTAAAGAGTTAACTGCATTGTATAAGAGTCAAGAGATTCAAGCTCATAATGGATCAATTTGGAGTATTAAGTTTAGTTTAGATGGGAAATATCTTGCTAGTGCTGGTGAGGATTGTGTGATTCATGTTTGGCAGGTTGTGGAATCTGAGAGGAAAGGGGAGTTGTTGCTTATGGAGAAACAAGAGGATGTTAATGTTAATATGTTGTTTCTTGTTAATGGGTCACCGGAACCCGCGATGTTGTCTCCTTTGGCGGATAATCTTCTGGAGAGGAAGAGAAAGGGGAGGTCATCTGTTAGTAGGAAGTCGTTGAGTTTGGACCAGTTTGTGGTCCCTGAACATGTGTTTGCACTCACCGAAAAGCCCGTTTGCTCCTTTAAAGGTCATTTGGATGATGTGCTTGACCTCTCTTGGTCTAAGTCTCAGCACTTGCTCTCATCTTCAATGGACAAAACAGTGCGGCTGTGGCATTTGTCTAGCAAGTCTTGTTTGAAGATTTTTTCACACAGTGACTATGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGTGGATCTTTGGATGCTAAGGTTCGCATATGGAGCATTCCGGATCGACAAGTTGTTGATTGGATCGATCTTCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGGTGCACTAGTTGGTTCATACAAGGGTAGCTGTCATTTATATAATACATCTGAAAATAAGTTGCAACAGAAAAGTCAGATCAATCTGCAGAACAAGAAAAAGAAATCAAATCACAAGAAAATTACTGGTTTCCAGTTTGCCCCAGGAAGTTCATCAGAAGTACTTATCACATCTGCTGACTCTCGAATACGGGTTGTTGATGGTATTGATCTGGTTCATAAGTTTAAAGGCTTTAGAAATGCAAGTAGTCAGATTTCAGCCTCCCTCACAGCAAATGGTAAATATATTGTTGCTGCAAGTGAGGATTCCCATGTATACATCTGGAAAAATGAAGCCGATTGCAGGCCCAACAGAAGTAAAGGTGTCACCGTGACACAGTCCTATGAACATTTTCACTGTAAAGATGTGTCAGTGGCCATTCCCTGGCCTGGTATGGGTGATGCATGGGACATGCATGATACATTTTCTGGAGCACAAACCGAGCTTGATAGCAACAACGACGAAATCGCATCAGCCAATCATCCTCCCACACCTGTAGAGGAAAACTTCGGTGTCGAGGGTTCACGATCTGCTTCAGGTTACAATAGTCCACATCACGCAACCATTGCGAGTGCGACAAACAGTTACTTTTTTGATAGAATTTCTGCAACATGGCCGGAAGAAAAACTTCTTCTAGCTGCAAGAAATCAAAGCCCTCGTGTCAGTATGGATTTCTCAAACGGGGTAAGTCAAAAAATGTCAGCCTGGGGTATGGTGATTGTTACTGCCGGTCTTCGAGGTGAGATTAGAACTTTCCAAAATTTTGGATTGCCACTTCGAATATAA 2568 0.426 MNKPILISQEDQHQQQHQHQHQQLDQQDFFYESHDRLLSLSSSCSCSNSNSDQEDEDQENNNNNCNYNFALNSYDIWISQPSSVSERRTRLLQTIGLSSDFALSRGNPIPPYNAIFRSKSDGHNNNSNNSCFISSTVNVNSSIPGNSGGSPAKPPSGKNSSRRSHSGVDFLPGNSSTLPDTVEISCEAVVSREIECSEIEKGEEQACTIRDLDNGKEFVVKEVREDGMWNKVKEVSTGRQLTMEEFEMTVGQSPIVQELMRRQNHEETGDVAGGGVGNGSNGHGGCSKGKKKGGSWLKSIKSVASSMAGHKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGKSCKELTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLMEKQEDVNVNMLFLVNGSPEPAMLSPLADNLLERKRKGRSSVSRKSLSLDQFVVPEHVFALTEKPVCSFKGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWIDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKSQINLQNKKKKSNHKKITGFQFAPGSSSEVLITSADSRIRVVDGIDLVHKFKGFRNASSQISASLTANGKYIVAASEDSHVYIWKNEADCRPNRSKGVTVTQSYEHFHCKDVSVAIPWPGMGDAWDMHDTFSGAQTELDSNNDEIASANHPPTPVEENFGVEGSRSASGYNSPHHATIASATNSYFFDRISATWPEEKLLLAARNQSPRVSMDFSNGVSQKMSAWGMVIVTAGLRGEIRTFQNFGLPLRI 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03153 855 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 369 402 - -
Mepo6g03153 855 MobiDBLite consensus disorder prediction 267 348 - -
Mepo6g03153 855 PANTHER WD REPEAT DOMAIN 44 22 852 IPR040324 -
Mepo6g03153 855 MobiDBLite consensus disorder prediction 142 176 - -
Mepo6g03153 855 MobiDBLite consensus disorder prediction 747 776 - -
Mepo6g03153 855 MobiDBLite consensus disorder prediction 1 24 - -
Mepo6g03153 855 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 522 556 - -
Mepo6g03153 855 FunFam WD repeat-containing protein 44 463 729 - -
Mepo6g03153 855 MobiDBLite consensus disorder prediction 307 332 - -
Mepo6g03153 855 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 482 516 - -
Mepo6g03153 855 Gene3D - 358 713 IPR015943 GO:0005515
Mepo6g03153 855 PRINTS G protein beta WD-40 repeat signature 388 402 IPR020472 -
Mepo6g03153 855 PRINTS G protein beta WD-40 repeat signature 500 514 IPR020472 -
Mepo6g03153 855 PRINTS G protein beta WD-40 repeat signature 542 556 IPR020472 -
Mepo6g03153 855 SMART WD40_4 558 596 IPR001680 GO:0005515
Mepo6g03153 855 SMART WD40_4 609 648 IPR001680 GO:0005515
Mepo6g03153 855 SMART WD40_4 362 401 IPR001680 GO:0005515
Mepo6g03153 855 SMART WD40_4 516 555 IPR001680 GO:0005515
Mepo6g03153 855 SMART WD40_4 475 513 IPR001680 GO:0005515
Mepo6g03153 855 SMART WD40_4 649 690 IPR001680 GO:0005515
Mepo6g03153 855 SUPERFAMILY WD40 repeat-like 365 692 IPR036322 GO:0005515
Mepo6g03153 855 Pfam WD domain, G-beta repeat 368 400 IPR001680 GO:0005515
Mepo6g03153 855 Pfam WD domain, G-beta repeat 477 512 IPR001680 GO:0005515
Mepo6g03153 855 Pfam WD domain, G-beta repeat 652 690 IPR001680 GO:0005515
Mepo6g03153 855 Pfam WD domain, G-beta repeat 518 555 IPR001680 GO:0005515
Mepo6g03153 855 ProSiteProfiles Trp-Asp (WD) repeats profile. 482 522 IPR001680 GO:0005515
Mepo6g03153 855 ProSiteProfiles Trp-Asp (WD) repeats profile. 369 410 IPR001680 GO:0005515
Mepo6g03153 855 ProSiteProfiles Trp-Asp (WD) repeats profile. 522 556 IPR001680 GO:0005515
Mepo6g03153 855 FunFam Transducin/WD40 repeat-like superfamily protein 327 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03153 Mepo-Chr6 43205594 43211348 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03153 K20241 - gmx:100815065 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03153 6 43205594 43211348 Mepo6g03153 6 43205594 43211348 ECH