Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03146 ATGGGAGATCATTATAGAGCTGTTTCTTTTGAGGAGTTACCTTCACATTTGATATTGGAAATTCTGTGCTCAGGGAAGCTCAGTGCAATGGACCTTGTTTCTTTGGAATTTACTTCAAAAACTTTTGGTGCTAGAAATGGCATATACCCTTTAAAGTTTAAGTCATTGGTAGACTTTGCTGCATTTCAGTTGTGTAGTTCTCATGCCATCTTTTCCAAGATGGTTTTGAATTCTCAGAATGAGTTGTATGATCGATGTGGTGGAAATTGGAAGCGAGTTTTGAGGTTCTTGCAGTCTTTGGAACAATCATCTGATATGGTTGAGACATCATTAGGAAATATGCAAATTACAACAGGAAATTATCACACCTTGGCAATCAGAAACTCCTCGGTCTATTCTTGCGGTTCTAGTTTGTGTGGTGTACTTGGTCAAGGGTCTGAAACAACACAGCGTACATCGTTTACCCGAATTAATTTCCCACCTTTGGCGCGTGTGGCACATGTTTCGGCCTCATATAACCATGCAGCTTTTGTTATGGAATCTGGAGAGGTATTCACATGTGGAGATAATTCATCTTTTTGTTGTGGTCATAGAGATACAAATCGACCAATTTTCAGGCCACGTCTTGTTGAATCCTTAAAGGGGATTCCTTGCAAGCAGGTTTCAGCAGGGCTAAACTTCACAGTCTTCCTCACCAGACAAGGTCATGTTTATACATGCGGAAGCAACTCGCATGGCCAACTTGGTCACAGTGACACGCTGGACAGACCAAGCCCCAAAAAGATTGAAGTCCTTGGTAGTATAGGCCGTATCGTTCAAGTTGCTGCTGGACCAAACTATATCTTATCTGTAACAGAAGGTGGATCAGTCTACTCCTTTGGATCAGGTTCTAATTTCTGTCTTGGCCATGGTGAGCAACATGACGAGTTACTGCCACGCTGCATACAGAAATTTAGAAGAAATGGTATTCATGTTGTCCGTGTATCTGCTGGGGATGAGCATGCAGCGGCGCTTGATTCAAATGGATTTGTATATACATGGGGCAAGGGATATTGTGGCGCTTTAGGCCATGGAGATGAGATTGAAAAGACAAGACCAGAATTGTTGTCTAATCTCAAGAATCACTTAGCCGTTCAGGTGTGTGCAAAAAAGAGAAAAACCTTTGTGCTAGTTGATTCAGGTGTGGTCTATGGCTTTGGCTCCATGGCATTTGGAAGCCTAGGATTTCCGGATGCTAGAAGGCTAACTAATAAAATCTTGAAGCCTAGAATCTTATACACATTAAGAACTCACCATGTTTCTCAAATTAGCACTGGCTTGTACCACACTGTGGTAGTCACTAACCGTGGAAAAATACTCGGCTTTGGAGACAATGAAAGAGCTCAACTTGGTCATGATACATTGAGACATTGCCTTGAGCCTACTGAAATTTTCATAGAAAATTCATCGTCTGAAGATGTTGATCCTATGTTATAA 1476 0.416 MGDHYRAVSFEELPSHLILEILCSGKLSAMDLVSLEFTSKTFGARNGIYPLKFKSLVDFAAFQLCSSHAIFSKMVLNSQNELYDRCGGNWKRVLRFLQSLEQSSDMVETSLGNMQITTGNYHTLAIRNSSVYSCGSSLCGVLGQGSETTQRTSFTRINFPPLARVAHVSASYNHAAFVMESGEVFTCGDNSSFCCGHRDTNRPIFRPRLVESLKGIPCKQVSAGLNFTVFLTRQGHVYTCGSNSHGQLGHSDTLDRPSPKKIEVLGSIGRIVQVAAGPNYILSVTEGGSVYSFGSGSNFCLGHGEQHDELLPRCIQKFRRNGIHVVRVSAGDEHAAALDSNGFVYTWGKGYCGALGHGDEIEKTRPELLSNLKNHLAVQVCAKKRKTFVLVDSGVVYGFGSMAFGSLGFPDARRLTNKILKPRILYTLRTHHVSQISTGLYHTVVVTNRGKILGFGDNERAQLGHDTLRHCLEPTEIFIENSSSEDVDPML 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03146 491 Pfam Regulator of chromosome condensation (RCC1) repeat 181 231 IPR000408 -
Mepo6g03146 491 Pfam Regulator of chromosome condensation (RCC1) repeat 235 280 IPR000408 -
Mepo6g03146 491 Pfam Regulator of chromosome condensation (RCC1) repeat 341 382 IPR000408 -
Mepo6g03146 491 Pfam Regulator of chromosome condensation (RCC1) repeat 288 338 IPR000408 -
Mepo6g03146 491 Gene3D - 52 291 IPR009091 -
Mepo6g03146 491 SUPERFAMILY RCC1/BLIP-II 113 411 IPR009091 -
Mepo6g03146 491 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 394 449 IPR000408 -
Mepo6g03146 491 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 164 477 - -
Mepo6g03146 491 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 328 338 IPR000408 -
Mepo6g03146 491 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 342 393 IPR000408 -
Mepo6g03146 491 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 234 IPR000408 -
Mepo6g03146 491 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 288 341 IPR000408 -
Mepo6g03146 491 PRINTS Chromosome condensation regulator RCC1 signature 289 305 IPR000408 -
Mepo6g03146 491 PRINTS Chromosome condensation regulator RCC1 signature 325 338 IPR000408 -
Mepo6g03146 491 PRINTS Chromosome condensation regulator RCC1 signature 436 452 IPR000408 -
Mepo6g03146 491 PRINTS Chromosome condensation regulator RCC1 signature 452 466 IPR000408 -
Mepo6g03146 491 PRINTS Chromosome condensation regulator RCC1 signature 344 360 IPR000408 -
Mepo6g03146 491 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 436 446 IPR000408 -
Mepo6g03146 491 SUPERFAMILY RCC1/BLIP-II 379 478 IPR009091 -
Mepo6g03146 491 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 235 287 IPR000408 -
Mepo6g03146 491 Gene3D - 292 487 IPR009091 -
Mepo6g03146 491 Pfam Regulator of chromosome condensation (RCC1) repeat 433 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03146 Mepo-Chr6 43123342 43129678 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03146 - - lang:109357264 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03146 6 43123342 43129678 Mepo6g03146 6 43123342 43129678 ECH