Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03139 ATGACGAAGAAGAAAGAGCGAAACGTTAACCTCTCCGGTAAACCAAAGCACTCCAACGACGCTAACCGGAGCAATGACTCCAAGACCGAGAAGCGCTCCGCCGCCACCGTCCGCCGTCTCAAGATGTACAAAACCCGACCCGTTCGTAACCGTAAGGGTCATGTCTTGACTAACGAGTATCAATCCAAAGATCTTCCATGCACCAGAATCAAACCCGATCGTCAATGGTTCGGGAATACTCGTGTTGTGAATCAGAAAGAGCTTGAGTTTTTTAGAGAAGAAATGGCGAAGCATAGTGCAAGTAATTACAATATTATTCTTAAGGGGAAGAATTTGCCTATGTCGCTTCTCAATGATTACCAGAAGCAATCGAGGGTTCATCTTCTTGATAGAGAGCCTTTTTCGGATGCATTTGGACCTAAGACTAAAAGAAAGCGTCCAAGTCTTTTAGCTTCTGATTATGAGTCTTTAGCTAAGAAAGCTGATGGTTCTCAAGATGCTTTTGAAGAGAAGCATGCTTCTGGTACGGCTGCAGAAGCTGATGAAGCAGATGGATTTAGAGACTTAGTGCGACATACCATGTTTGAAAAGGGTCAAAGCAAACGCATATGGGGTGAACTTTACAAAGTGATAGATTCTTCAGATGTTGTTGTCCAGGTTATAGATGCAAGGGATCCACAAGGCACAAGATGTTACCATTTAGAGAAGCATTTGAAAGAAAATTGCAAGCACAAACACATGGTGCTTTTATTGAACAAGTGCGATCTAATTCCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATATCCAACGCTAGCATTCCATGCAAGTATTAATAAGTCCTTTGGAAAGGGTTCACTTCTATCGGTTCTGAGACAATTTGCAAGATTGAAAAGTGATAAGCAAGCAATATCTGTTGGTTTCGTTGGATATCCAAATGTTGGGAAGTCATCGGTGATCAACACATTGCGTACAAAGAATGTTTGCAAGGTTGCTCCAATTCCAGGCGAAACAAAAGTCTGGCAGTATATTACCCTTACAAAGAGGATCTTTTTGATTGATTGTCCAGGGGTTGTCTACCACAACAATGACTCTGAAACAGATGTTGTGCTGAAGGGTGTGGTTCGTGTAACAAACTTGAAAGATGCTGCTGATCATATAGGCGAGGTTTTGAAACGTGTGAAGAAGGAGCACTTGACAAGAGCTTATAAAATTAAAGAGTGGGTTGATGAAAATGACTTCCTACTTCAGCTTTGCAAATCATCTGGCAAACTCCTTAAGGGCGGTGAACCTGACCTTATGACTGCAGCAAAGATGATACTTCATGATTGGCAGAGGGGTAAAATTCCCTTTTTTGTCCCGCCTCCACGACAGGATGCCTTGTCTGAGTCCGAGGAGCCTAATGTGAATGGCATAGATGTTGACGAGGCAGTTGACCATAACCAGGCATCTGCTGCCATTAAAGCTATTGCAAATGTTCTTTCATCCCAGCAGCAAAGAAATGTTCCAGTTCAAGGGGATTTATATAACGAGAATGAGTTGAATGAAGAAACTACTGACCAACTTCCAAACACTGGGGATTATACAGATGAAGATAGTGACGCATCTGAGGAGGATCCATCCACTGAGGTCCCATCTGAGCAGGATCCATCCACTGAGGTCCCATCTGAGCAGGATCCATCCACTGATGTTCCATCTGAGCAGCTTATTTCTGCCGAGCCGGTCCCAACAAGTGAATCATGA 1755 0.4319 MTKKKERNVNLSGKPKHSNDANRSNDSKTEKRSAATVRRLKMYKTRPVRNRKGHVLTNEYQSKDLPCTRIKPDRQWFGNTRVVNQKELEFFREEMAKHSASNYNIILKGKNLPMSLLNDYQKQSRVHLLDREPFSDAFGPKTKRKRPSLLASDYESLAKKADGSQDAFEEKHASGTAAEADEADGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLTRAYKIKEWVDENDFLLQLCKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPFFVPPPRQDALSESEEPNVNGIDVDEAVDHNQASAAIKAIANVLSSQQQRNVPVQGDLYNENELNEETTDQLPNTGDYTDEDSDASEEDPSTEVPSEQDPSTEVPSEQDPSTDVPSEQLISAEPVPTSES 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03139 584 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 204 365 IPR030378 GO:0005525
Mepo6g03139 584 Pfam NGP1NT (NUC091) domain 42 166 IPR012971 -
Mepo6g03139 584 Gene3D - 365 457 IPR023179 -
Mepo6g03139 584 Pfam 50S ribosome-binding GTPase 310 400 IPR006073 GO:0005525
Mepo6g03139 584 PANTHER GTP-BINDING PROTEIN-RELATED 28 555 - -
Mepo6g03139 584 MobiDBLite consensus disorder prediction 1 34 - -
Mepo6g03139 584 MobiDBLite consensus disorder prediction 161 180 - -
Mepo6g03139 584 MobiDBLite consensus disorder prediction 549 584 - -
Mepo6g03139 584 MobiDBLite consensus disorder prediction 511 584 - -
Mepo6g03139 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 438 IPR027417 -
Mepo6g03139 584 FunFam Nucleolar GTP-binding protein 2 367 457 - -
Mepo6g03139 584 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Mepo6g03139 584 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Mepo6g03139 584 Gene3D - 194 364 IPR027417 -
Mepo6g03139 584 MobiDBLite consensus disorder prediction 511 533 - -
Mepo6g03139 584 MobiDBLite consensus disorder prediction 534 548 - -
Mepo6g03139 584 CDD NGP_1 206 362 IPR024929 GO:0005730
Mepo6g03139 584 FunFam Nuclear/nucleolar GTPase 2 203 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03139 Mepo-Chr6 43074970 43080579 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03139 K14537 - gmx:100788649 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03139 6 43074970 43080579 Mepo6g03139 6 43074970 43080579 ECH