Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03045 ATGAGAAACATTACAAAAATAGCATGCTTCAATATTCTCTTTCTTTCTATAATAGCACTTCATGTTCAATGCCGTTTTCTTCCTAATAAATTGATTTCCAATGGAGTTGATGATGTTCAAGCAGAAGAAGATTCTTATCTACTTCTTAATAATGATGATAATGAGAAAGGGGTTATTATTGAATCTTCTTCTAATCCAGAGGAGTATTGTAAACAAATGTATGGGTTTTTGCCATGTTCTAATAACATTCTTGGTCATTTGTTTCTGATTTTGGTTTATGAATACTTGTTATTCCATGGAGAATCATATTTGGCTGCTGGAGGTGAACAAATCTTCAAGATTCTTGGTCCAGGTGTTTTTGGTGCTAGTGCTTTTGATATTCTTGGTGCCCTTCCTGAATCCTTAATTCTTCTTGTCACCGGACTTTCAAGTGATAAGGAGAGTGCGCAAGAGTATGCTTCTACTGGAGTTGGATTGTTAGCTGGATCATCCATCCTGCTTCTCACAGTTGTGTGGGGAACTTGTGTTATTGTTGGCAAGCAAAGCTTTAAAAACGACTCTCATTCTACTGATACCTCATATTCATCAAATGGAAGAATAATACAAGCTTTGACTGGTTATGGCATTACTATGGATATAGATACTAGAAAGATGGCAAGAATCATGGTTTTCTCTGTTATTCCACTCCTCATCATGCAGATTCCTACTTTGTTCTATTTCTCTACAACATTACGCAATGTGACCTTGATAGTTTCTCTCATCATTGCTGTCACTTTTCTTATCTCATACTTCATTTACCAGCTCTTTAAACCTCAGATAGAGAAAACAAGACTGGAATACATAAAGCATGATGATTTAATTTTAAGAATTTTCCAACGTGTTGAAAAGCAAACTCTACAAAAGATCCTAGCTGAGGATGGAACTCCTAATGTAGCTGCCATAAATGGGCTATACCATGAATTCAGTCAACATGGCGAAAAACACTTATCAACTTCTGAAGTAAAAGAGTTGTTGCTTGGGAACAATTTAGCCAACACAAATATCAGAGAGGACCAAATAGCAGATATGTTAAAAGCTTTTGACAAAAATGGCGACCAAATTATAACCAAAGAAGAATTTGTTAGTGGCTTAACAGAATATATTAACCAAACAAAGCATGCTTTGGATAGAAAGTACATCCCTAAAGAATCTATGAACAAAATGTATCAGACTTTTATCAAGCCATGGATTGAACACGTGAGAAAAGAACGTGAATTGAAGGGACATCTTATTTCTGGAGTCTTAAGTCATGCTCAAAATGATATGGTTGGTAGGATGCTCAATGATGATGGTACAGCTGATAAAGATGCTATCAAAAGGTTATTTGAGCAAGTTGATGGCGATGGTGATAACCATGTTTCAAGATCCGAGTTAGAGAAAATCGTGAGGGAGACTCAGTTTGGTAAGGCTGTAGATGCAGAGGAAGCAGTCTCAAAACTCCTTCATGATCTTGATGCCAACAAAGACAATGAAATTAGTGAGAATGAATTTGTTGATGGCTTCACTAAATGGATAAACTCAAATTCTAGTAAAGCAGGAAGCTCAAAATCTTCTTCTCATGAAACTCATCAAACATGGGAAGATGTTGAGAAGGTAATGGAAGAGAATCAAACCAAAGGGGTGACTGCATGGTTAGAAGCTATAGCATATGTGGTGTTGGGAATTACTATGTTGTCACTTCTTGCAGAGCCTCTAATAGCAAGTGTTCAAAAATTCTCTGAAGCTGCAGGAATTTCATCATTTTTCATCTCTTTCATTTTAGTCCCTTTGGCTACAAATTTTAGAGAAGCAACCTCAGCAATCAAAGAAGCTAGCCACAAAAAAAGTAGTAATACTTCTCACACAATGTATGAGATTTATGGAGCAGTGTTTATGAACAACATTCTTGGCTTTGTGGTGATATCTATTCTTATATATATGAGAGAGATCACTTGGGAATTTTCAGCTGATGTATTGGTGGTGGCAATTGTTTGTATTGTGATGGGTCTCACTACTAGTTTTCGTTCCACTTTTCCTTTGTGGACATCCTTCCCAACATACCTCTTGTATCTGATATCATTGGTTATGGTTTTTGTTCTTAAAGATGTTCTCAATTACATGTAA 2142 0.3613 MRNITKIACFNILFLSIIALHVQCRFLPNKLISNGVDDVQAEEDSYLLLNNDDNEKGVIIESSSNPEEYCKQMYGFLPCSNNILGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILLVTGLSSDKESAQEYASTGVGLLAGSSILLLTVVWGTCVIVGKQSFKNDSHSTDTSYSSNGRIIQALTGYGITMDIDTRKMARIMVFSVIPLLIMQIPTLFYFSTTLRNVTLIVSLIIAVTFLISYFIYQLFKPQIEKTRLEYIKHDDLILRIFQRVEKQTLQKILAEDGTPNVAAINGLYHEFSQHGEKHLSTSEVKELLLGNNLANTNIREDQIADMLKAFDKNGDQIITKEEFVSGLTEYINQTKHALDRKYIPKESMNKMYQTFIKPWIEHVRKERELKGHLISGVLSHAQNDMVGRMLNDDGTADKDAIKRLFEQVDGDGDNHVSRSELEKIVRETQFGKAVDAEEAVSKLLHDLDANKDNEISENEFVDGFTKWINSNSSKAGSSKSSSHETHQTWEDVEKVMEENQTKGVTAWLEAIAYVVLGITMLSLLAEPLIASVQKFSEAAGISSFFISFILVPLATNFREATSAIKEASHKKSSNTSHTMYEIYGAVFMNNILGFVVISILIYMREITWEFSADVLVVAIVCIVMGLTTSFRSTFPLWTSFPTYLLYLISLVMVFVLKDVLNYM 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03045 713 SUPERFAMILY EF-hand 317 518 IPR011992 -
Mepo6g03045 713 Gene3D - 387 529 - -
Mepo6g03045 713 Pfam EF-hand domain pair 449 512 IPR002048 GO:0005509
Mepo6g03045 713 Gene3D - 306 386 - -
Mepo6g03045 713 ProSitePatterns EF-hand calcium-binding domain. 361 373 IPR018247 -
Mepo6g03045 713 ProSiteProfiles EF-hand calcium-binding domain profile. 485 520 IPR002048 GO:0005509
Mepo6g03045 713 ProSitePatterns EF-hand calcium-binding domain. 459 471 IPR018247 -
Mepo6g03045 713 CDD EFh 451 515 IPR002048 GO:0005509
Mepo6g03045 713 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Mepo6g03045 713 SMART efh_1 489 517 IPR002048 GO:0005509
Mepo6g03045 713 SMART efh_1 450 478 IPR002048 GO:0005509
Mepo6g03045 713 SMART efh_1 352 380 IPR002048 GO:0005509
Mepo6g03045 713 ProSiteProfiles EF-hand calcium-binding domain profile. 348 383 IPR002048 GO:0005509
Mepo6g03045 713 Pfam Sodium/calcium exchanger protein 561 704 IPR004837 GO:0016020|GO:0055085
Mepo6g03045 713 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 73 706 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mepo6g03045 713 ProSiteProfiles EF-hand calcium-binding domain profile. 446 481 IPR002048 GO:0005509
Mepo6g03045 713 Pfam EF hand 353 373 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03045 Mepo-Chr6 42034532 42041304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03045 401 706 EF-hand Containing Proteins AT1G53210 38.532 3.92e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03045 - - gmx:100799062 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03045 6 42034532 42041304 Mepo6g03045 6 42034532 42041304 ECH