Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03036 ATGTCTCTCTCTTTCTCTTACCGCCCCCGTTCACGTTCCCGTTCCCGCCGGAACCACACACCACCCTTCTTCTTCCTCTTCCTCGGCGTGGTAGCAATCCTCTGCAGTCACGCCCATGCTCGCTTTTCTACACGCGATCTAATCTCCGATGGTTCCAGTGTTCTTCGTCTCCCGACAGAAGCTGAATCCACCTGTGAACAGACCTATGGATTCTTACCGTGCACCACCACTGTTCTTGGAAACTTGTTCCTTATCTTAGTGTATGGATTTCTTATGTACACTGCTGCTACTTTTTTGTCTAATGGGAGTGAGCTTTTGCTTGAGATCTTAGGTCCTGGCATTGTTGGTGGATTGTTTCTTCCTATCCTTGGTGCTCTTCCTGATGCCATGCTCATTCTTGTGTCTGGGCTTTCAGGAAGTACTGAAGTTGCTCAAAGTCAGGTATCTGTTGGAATGGGACTGCTAGCTGGATCAACAGTGCTGCTTCTGACTATAATATGGGGGACTTGTGTGATTGTAGGCAAGTGTGACATTGAGGATTCAATTGCACTAGATTCAACAGACACCAGGGGATTCCATTTAACTGGTTCTGGTGTTAGTACTGATATTTGGACAAGCTACGCCGCAAGGATTATGATTATATCTGTCATTCCATTTGTGATTGTCCAATTACCACAAATACTCCATTCAACTTCTGGAAGGCACTTGGCTGTTTTGATTGGCTTTGTTGTCTCTGTCTGTTTATTGATCTCTTATTGCCTTTACCAGATTTTCCAGCCCTGGATACAAAGAAGAAAATTGGAATATATTAAACACAAACATGTTATTGTGGGACTTTTGAGACATTTGAAGATGCGTTCATTGGGAAGGCTGCTGAAAGATGATGGCCAACCCGATAAAGAAGTTATTAGAAAGTTGTTTACAACAATTGATGAAAATAAAGATGGACATCTTACTCATGGTGAAATGACAGCATTGGTTGTTGGAATTCAATTTGAGGAGATTGACCTTGATCATGATGACGCTGTGACAAAAATAATGGCAGATTTTGATACTTCTCGTAATCAACTTATTGACGAACAAGAGTTTGTTAATGGAGTCTGTAGATGGCTTCAAGCGGCCCAGCGTTCTCGGGTTGCATCTGGTGATGCTGGTCCACACACTGTGAAGTTTTTAAGTGATTTTCACACGGAAACAAAGAGGGAACATGATCTTCTGGATGTGGGGGGTCAGAGTGATGAAGGTGGTGAAGGTGTGGAGAACGCTAGATGGATTTCCATCAAAGCAGGACTGTTCCTTTTACTGGGTTCTTGTATCGCTGCTGCATTTGCTGATCCTCTGGTTGATGTGGTCGACAATTTCTCTGATGCTACAAGTATTCCAGCTTTCTTTATTTCCTTCATTTTTCTACCTCTAGCAACCAATTCAAGTGAAGCAGTATCAGCAATAATTTTTGCTAGTCGTGATAAGAGGCAAACTGCGTCGTTAACATTTTCCGAGATATATGGTGCAGTAACAATGAACAATGTGTTATGTCTATCGGTCTTCTTGGCGCTGGTATACGTGAGGGGATTAACATGGGACTTCTCTTCAGAAGTTTTGGTTATTCTCATCGTTTGCATTGTCATGGGTGCCTTTGCCAGTTTCCGCACAGTTTTCCCTCTATGGACATCTATAACGGCTATCCTACTTTATCCTTTCTCCCTGGCATTGGTCTATGTTCTTGATTATCAATTTGGGTGGTCATAG 1749 0.4294 MSLSFSYRPRSRSRSRRNHTPPFFFLFLGVVAILCSHAHARFSTRDLISDGSSVLRLPTEAESTCEQTYGFLPCTTTVLGNLFLILVYGFLMYTAATFLSNGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSTEVAQSQVSVGMGLLAGSTVLLLTIIWGTCVIVGKCDIEDSIALDSTDTRGFHLTGSGVSTDIWTSYAARIMIISVIPFVIVQLPQILHSTSGRHLAVLIGFVVSVCLLISYCLYQIFQPWIQRRKLEYIKHKHVIVGLLRHLKMRSLGRLLKDDGQPDKEVIRKLFTTIDENKDGHLTHGEMTALVVGIQFEEIDLDHDDAVTKIMADFDTSRNQLIDEQEFVNGVCRWLQAAQRSRVASGDAGPHTVKFLSDFHTETKREHDLLDVGGQSDEGGEGVENARWISIKAGLFLLLGSCIAAAFADPLVDVVDNFSDATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILIVCIVMGAFASFRTVFPLWTSITAILLYPFSLALVYVLDYQFGWS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03036 582 SUPERFAMILY EF-hand 297 372 IPR011992 -
Mepo6g03036 582 Pfam Sodium/calcium exchanger protein 432 573 IPR004837 GO:0016020|GO:0055085
Mepo6g03036 582 Pfam Sodium/calcium exchanger protein 83 259 IPR004837 GO:0016020|GO:0055085
Mepo6g03036 582 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 69 574 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mepo6g03036 582 ProSitePatterns EF-hand calcium-binding domain. 351 363 IPR018247 -
Mepo6g03036 582 Gene3D - 419 575 IPR044880 -
Mepo6g03036 582 Gene3D - 255 381 - -
Mepo6g03036 582 ProSitePatterns EF-hand calcium-binding domain. 311 323 IPR018247 -
Mepo6g03036 582 ProSiteProfiles EF-hand calcium-binding domain profile. 298 333 IPR002048 GO:0005509
Mepo6g03036 582 FunFam Sodium/calcium exchanger family protein / calcium-binding EF hand family protein 275 397 - -
Mepo6g03036 582 FunFam Sodium/calcium exchanger NCL2 418 575 - -
Mepo6g03036 582 Pfam EF-hand domain pair 301 365 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03036 Mepo-Chr6 41955993 41961389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03036 38 582 EF-hand Containing Proteins AT1G53210 68.254 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03036 - - gmx:100809896 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03036 6 41955993 41961389 Mepo6g03036 6 41955993 41961389 ECH