Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02377 ATGAAGGTCCGATTAATGAAAATGAGGGAGGCCCACACCCAAAAAGGCGGCCGTGCTTCCTTCTGCTCGCTCGTATGGGACCAGAAAGCCGAACATCTCGTCACCGCCTCCTCTTCCGACGTCTCCGTCTCGATTCATAACCCTCTTCTTCCTTCCGCCGCTCCCAAGATTCTCCGTCACCACCGTGACGGTGTTACTGCTTTGGCTCTTAGCCCTAATTCCACTTGTCTTGCTTCTGGATCTGTCGATCACTCCGTTAAACTCTACAAGTTTCCAGGTGGAGAGTTCGAGACAAATATAACGAGGTTTACACTTCCGATACGTTCCCTGGCATTTAACAAGAAAGGAAGCATGTTAGCAGCTGCTGGTGACGATGAGGGCATCAAGCTCATAAACACAGTTGATGGCTCTATTGCGAGGGTTCTGAAGGGGCACAGAGGACCAGTTACTGGCTTAGCTTTCGACCCTAACGGTGAATACTTAGCATCTCTGGATTCAACTGGAACCGTTATCATCTGGGAACTCCACTCAGGGAAAAACCTTCACAACCTTAAGGGCATAGCTCCTGACACTGGGTTAGATCTTTTAACCATGAATGTTCTTTGCTGGAGTCCTGATGGTGAGACCTTAGCCATTCCCGGATTGAAAAATGATGTCGTAATGTATGATAGGGACACTGCTGAGAAGTTGTTCACTCTTAGAGGAGATCATATTCAGCCTATATGTTTTTTGTGTTGGTCACCCAATGGAAAGTACATGGCTACCTCTGGTTTGGATAAGCAGATTCTGATATGGGATGTTGACAAGAAGCAGGATATTGACAGACAGAAATTCGATGAAAGAGTGTGTTGCATGGCATGGAAGCCGATCGGGAATGCCTTGGCTGTTATTGATGTTATGGGAAAGTACGGTATATGGGACAATGTTATTCCTTCATCTATGAAGTCTCCAACCGAGGATATACCTATGCTGGGCAAGAACAGTAACGGGCTTCTTTTGTTTGATGAGGAGGAAGAGGACAATAGTGTTAGTGGGAGCTTGAGTGATCTTGGTGAAAATAGTAACGGTGAGTTTGAGCCACCAACTAGCAGGAAAAGATTGCGCAAACATTCCTTTAGCGAGGAAAATTTGGATGAGGATGGAGAAGAATATGGAATTGATCTGTTTCCAAAGGTTGAATCTCACAAGAAAAGGAACCGGTCAGTCAAAGAAAAATTGGATAATGGCAGTGTGGGATTTAGAAGCACAATGGTAACATCTAAGACAAAAATGCAGGAGGCATTTCAATCAGGATCCACTCCAGTGCAGCCTGGAAAAAGGCGCTTCTTATGCTATAATATGCTTGGAAGTATAACCACTGTCGATCACGATGGATACTCTCATATTGAGATTGATTTTCATGACACTGGAAGCAGTCCTCGAGTTCCATCAATGACTGACCATTTTGGATTTACAATTGCTGCATTGAATGAAAATGGAAGTGTCTTTGCAAATCCTTGCAAGGGGGAGAAGAACATGAGCACCCTCATGTATCGCCCATTTAGTAGCTGGGCTAGCAATAGCGAGTGGTCTATGCGCTTTGAAGGCGAAGAAGTAAAGGTTGTTGCACTTGGTGCCTCTTGGGTGGCTGCAGTAACAAGTTTTAACTATCTTCGCATCTTTACTGAAGGTGGTATGCAGAGACATGTAATTTCGCTAGATGGGCCAGCAGTGACTGCATCAGGTTTCAAGGATAAGCTTGTAGTTGTTACTCATGCTTCTGATTGTCTTTCCTCAAATGATCAGGTGTTAGAGTTTAGTTTATTTAATATAGCACAGGGGACCCAACCCCTTCGAGGTCGCTTGCCGATAACTCCTGGTTCTTCTTTAAGTTGGTTTGGGTTTAGTGAAGAGGGCCAATTGTGTTCTTACGATTCCAAGGGTGTGCTAAGATTATATACAAGTCAATTTGGTGGAAGCTGGTTCCCAGTCTTCAGTGCTATTAAAGAGAAGAAAACAGATGAAAACTATTGGATGGTGGGTTTGAATACAAACAAGTTAGTTTGTGTTGTATTGAAAAAGCCTGAATCCTTCCCACAGGTGGTGCCTAAACCAATCCTCACTTTAATGAATCTTTCATTTCCACTTGCTACATCTGATTTGGGAGCTGAAGCCCTTGAAAATGAGTTTATGATGAACAGCATGCATCTCTTTGAGGTTCAGAAAAAAATGGAAGAAATGGATAATGCTGGTTTGGATGCTAGTTTACTTGATGATGATGCTTTCAATTTGGAAGCAGCACAAGATAGATGCATACTAAGGCTAATAGCATCGTGCTGCAATAGTGATAAACTTGTGAGAGCTACTGAACTTGTCAAGCTTTTGTCACTGGAGAAATCAATGAAAGGTGCAATAAAACTTGTTACTGCTCTGAAACTTCCAAATTTGGCCGAAAAATTCAACGACATATTGGAGGAAAGGCTATACAATGAAGTTAAAAAGACTACGGATACCAACCTCAAGGAAAACAGTTCTGCACCTATTACATCAGATACTCTACCTAGCAGTAGCAAGGCTGAAACATCGAAAGCATCTATTATTTCATCATCACCAAACTTGTCTGCACCATCGTTCATAAAGAAAAATAAAACACAAGAGGCAGCTAAAGATGGAATGAATAAACCTGCAATTGTTAACGGAAGTATGAAGACAGGAGGAGATGAAACAAGTGACAAGAAAGGTAAGGAGGCAATGCAGGCTCCTCATCATCCACTTGGTTCCTCGGTAAAGTCGACAAATAAGCATGGAGTTGACAAATTGGAGCCTAGTTTGGTGACACCAACAAGACCGTCCAATCCATTTTTGAAGTCGTCAATGAAATGA 2862 0.4287 MKVRLMKMREAHTQKGGRASFCSLVWDQKAEHLVTASSSDVSVSIHNPLLPSAAPKILRHHRDGVTALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKKGSMLAAAGDDEGIKLINTVDGSIARVLKGHRGPVTGLAFDPNGEYLASLDSTGTVIIWELHSGKNLHNLKGIAPDTGLDLLTMNVLCWSPDGETLAIPGLKNDVVMYDRDTAEKLFTLRGDHIQPICFLCWSPNGKYMATSGLDKQILIWDVDKKQDIDRQKFDERVCCMAWKPIGNALAVIDVMGKYGIWDNVIPSSMKSPTEDIPMLGKNSNGLLLFDEEEEDNSVSGSLSDLGENSNGEFEPPTSRKRLRKHSFSEENLDEDGEEYGIDLFPKVESHKKRNRSVKEKLDNGSVGFRSTMVTSKTKMQEAFQSGSTPVQPGKRRFLCYNMLGSITTVDHDGYSHIEIDFHDTGSSPRVPSMTDHFGFTIAALNENGSVFANPCKGEKNMSTLMYRPFSSWASNSEWSMRFEGEEVKVVALGASWVAAVTSFNYLRIFTEGGMQRHVISLDGPAVTASGFKDKLVVVTHASDCLSSNDQVLEFSLFNIAQGTQPLRGRLPITPGSSLSWFGFSEEGQLCSYDSKGVLRLYTSQFGGSWFPVFSAIKEKKTDENYWMVGLNTNKLVCVVLKKPESFPQVVPKPILTLMNLSFPLATSDLGAEALENEFMMNSMHLFEVQKKMEEMDNAGLDASLLDDDAFNLEAAQDRCILRLIASCCNSDKLVRATELVKLLSLEKSMKGAIKLVTALKLPNLAEKFNDILEERLYNEVKKTTDTNLKENSSAPITSDTLPSSSKAETSKASIISSSPNLSAPSFIKKNKTQEAAKDGMNKPAIVNGSMKTGGDETSDKKGKEAMQAPHHPLGSSVKSTNKHGVDKLEPSLVTPTRPSNPFLKSSMK 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02377 953 Pfam WD domain, G-beta repeat 57 89 IPR001680 GO:0005515
Mepo6g02377 953 Pfam WD domain, G-beta repeat 140 173 IPR001680 GO:0005515
Mepo6g02377 953 SUPERFAMILY WD40 repeat-like 10 307 IPR036322 GO:0005515
Mepo6g02377 953 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 58 90 - -
Mepo6g02377 953 Pfam Anaphase-promoting complex subunit 4 WD40 domain 201 288 IPR024977 -
Mepo6g02377 953 ProSiteProfiles Trp-Asp (WD) repeats profile. 58 99 IPR001680 GO:0005515
Mepo6g02377 953 MobiDBLite consensus disorder prediction 833 874 - -
Mepo6g02377 953 Pfam Minichromosome loss protein, Mcl1, middle region 427 709 IPR022100 -
Mepo6g02377 953 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 142 179 - -
Mepo6g02377 953 SMART WD40_4 269 307 IPR001680 GO:0005515
Mepo6g02377 953 SMART WD40_4 93 132 IPR001680 GO:0005515
Mepo6g02377 953 SMART WD40_4 7 47 IPR001680 GO:0005515
Mepo6g02377 953 SMART WD40_4 135 174 IPR001680 GO:0005515
Mepo6g02377 953 SMART WD40_4 226 266 IPR001680 GO:0005515
Mepo6g02377 953 SMART WD40_4 51 90 IPR001680 GO:0005515
Mepo6g02377 953 CDD WD40 10 310 - -
Mepo6g02377 953 ProSitePatterns Trp-Asp (WD) repeats signature. 253 267 IPR019775 -
Mepo6g02377 953 MobiDBLite consensus disorder prediction 344 358 - -
Mepo6g02377 953 Gene3D - 2 196 IPR015943 GO:0005515
Mepo6g02377 953 ProSiteProfiles Trp-Asp (WD) repeats profile. 142 183 IPR001680 GO:0005515
Mepo6g02377 953 MobiDBLite consensus disorder prediction 342 376 - -
Mepo6g02377 953 MobiDBLite consensus disorder prediction 938 953 - -
Mepo6g02377 953 FunFam Transducin family protein / WD-40 repeat family protein 195 322 - -
Mepo6g02377 953 PANTHER WD REPEAT AND HMG-BOX DNA BINDING PROTEIN 1 912 - -
Mepo6g02377 953 MobiDBLite consensus disorder prediction 833 953 - -
Mepo6g02377 953 MobiDBLite consensus disorder prediction 359 376 - -
Mepo6g02377 953 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 234 268 - -
Mepo6g02377 953 ProSiteProfiles Trp-Asp (WD) repeats profile. 234 275 IPR001680 GO:0005515
Mepo6g02377 953 Gene3D - 197 308 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02377 Mepo-Chr6 32309754 32315126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02377 61 294 Miscellaneous Gene Families AT5G08390 26.695 2.60e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02377 K11274 - gmx:100809300 1463.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02377 6 32309754 32315126 Mepo6g02377 6 32309754 32315126 ECH