Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02325 ATGCTCAATAGCACCTACATAGCCTCTAGAGGAATTCAACATCCTCAAATGGAAACTACATCAGATATATACCCTCTAAATGATGCATATGCAATATTTTTATGGATTGGTACTCCAGTACAAGTTGTATTTGTTATGATTGACATAGGAAGCCCAATTTCATGGTCACAATGCGATCTATGTAATAATTGTTACCCTATGCAACGCCCTCCTTTTAATACTAGAGCATCAAGTACCTTTAGAGAACTTGGTTGTTACACAGATACATGTTTGATCCCAATGATGAGGGAAGTTTTTGGAAACTGCACTGGATGGACATGTAGATACAATGTGAAATATGGTACCAAGGATGAATCTCATTCCTTTGGTGCAATGGTGACTGATACACTTAATTTTGAACATTCCAATACAGAGATTAAGAATTTCATCATTGGTTGTGGAGATTCATATGATGGTCCATTTAGGACTCAATTCTCAGGTGTTCTTGGTTTAGGACGCGGTCCGCTTTCGGTTCAAAGTCAGCTCAATGCAAAGGCCTTTTCTATTTGTCCTGTAAGTCAAGGATCAGAAAATCCTTCATCTCTTGAGTTTTATGATACTCCACCTGAAATGAACCAACATGGTGTTGTTGGTGATAATAGCTCCATTATGGTTCCCTTAAGTGAGAACAGTGGATACCCTTTTTATTACTTTTTGCAATTTGTTGGTATAAGTATTAATGGGTTTATGTTGGATATTCAATCTAGAGTTTGGGGTTATGGATTGAACTATGATGGTGGGGTTATTATAGATATAGGAACAGTGCTAACTTATTTACCAAGTGATGCTTATAGTGTGTTCAGGTCAGAGATGCTTAGAACAAATCATAATCTTACAGTGAAGCAAGGATATGAAGGGTTAGAGTTTTGTTATAAAGATGATTCATCTAATGTATTTCCAACTATTGAACTTTACTTTCAAAATGGAGATATTGCAGGTAAAAATTTTGTGTCTTACAAGTTGAACAAGAAACAACTACTTTTCACACCAGAAGAAGGCACTGTTTGTCTATCATTTGCAGAAGGAAAAAGTTCTGCTCTTACTGTGATTGGAAGCAACCAACTCCAGGGAACTTTATTGGCGTATGATCTGGTCAATGAGATCCTTGTTCTCACATTTAATAAGTGTTAG 1170 0.3641 MLNSTYIASRGIQHPQMETTSDIYPLNDAYAIFLWIGTPVQVVFVMIDIGSPISWSQCDLCNNCYPMQRPPFNTRASSTFRELGCYTDTCLIPMMREVFGNCTGWTCRYNVKYGTKDESHSFGAMVTDTLNFEHSNTEIKNFIIGCGDSYDGPFRTQFSGVLGLGRGPLSVQSQLNAKAFSICPVSQGSENPSSLEFYDTPPEMNQHGVVGDNSSIMVPLSENSGYPFYYFLQFVGISINGFMLDIQSRVWGYGLNYDGGVIIDIGTVLTYLPSDAYSVFRSEMLRTNHNLTVKQGYEGLEFCYKDDSSNVFPTIELYFQNGDIAGKNFVSYKLNKKQLLFTPEEGTVCLSFAEGKSSALTVIGSNQLQGTLLAYDLVNEILVLTFNKC 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02325 389 SUPERFAMILY Acid proteases 26 385 IPR021109 -
Mepo6g02325 389 CDD pepsin_A_like_plant 29 380 IPR034161 -
Mepo6g02325 389 Gene3D Acid Proteases 9 197 IPR021109 -
Mepo6g02325 389 Pfam Xylanase inhibitor N-terminal 30 195 IPR032861 -
Mepo6g02325 389 Gene3D Acid Proteases 204 389 IPR021109 -
Mepo6g02325 389 PANTHER ASPARTYL PROTEASES 22 380 IPR001461 GO:0004190|GO:0006508
Mepo6g02325 389 ProSiteProfiles Peptidase family A1 domain profile. 30 385 IPR033121 -
Mepo6g02325 389 Pfam Xylanase inhibitor C-terminal 230 382 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02325 Mepo-Chr6 31391890 31393059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02325 20 376 Miscellaneous Gene Families AT1G77480 24.409 1.25e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02325 - K22683 tpra:123914878 679.093