Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02253 ATGGCGCAAGAAAATGCATCAAATTGCATCTACCTAGCAACATTCCTCATCATCTTCCTAACCATAATCTCATCTTCCTCTGCTTGGGTTGGTGTAAACTGGGGAACAATGACAACCCACCAACTTCCACCTAAGAAAGTTGTGAAGATGCTTAAGGACAACGGGTTTCGAAAATTGAAGCTTTTTGATGCTGATGATACCATTTTGACAGCTCTAATGGGTACTGATATCGAAGTTATGGTTGCGATTCCGAATGTCATGTTGAGCAAGATTAGTAACAGTCCTATGGATGCTGATTCTTGGGTTTATGAGAATGTTACTGCTTACTTGTTCAGAGGTGGTGTCAATATCAAGTATGTTGCTGTGGGTAATGAGCCTTTCCTCAAAGCATACAATGGTAGCTATCTAAATAAAACCCTTCCTGCTCTCAAGAATATACAGACCTCACTCAACAATGCAGGGTTGGAATCAAAGGTCAAAGTAACTGTTCCATTCAATGCTGACATTTACTATTCACCAGACTCAAATCCAGTGCCATCAGCAGGTGACTTCAGACCTGAATTAAGAGACATCACTATTGAAATAATCCAGTTTCTATATTCAACCAACTCAACTTTCACAGTTAATATCTACCCTTTCCTTAGTCTTTACTATGGACATGATAATTTCCCATTTGATTTTGCATTTTTTGATGGAAAGAATGAACCTCTTCGAGACGGAAAAGCAGTTTACAACAATGTCTTTGATGCAAATCTGGATACCCTTATGTGGGCTTTAGAAAAAGCAGGTTATCCTGACTTGCATGTTACAGTTGGTGAAGTTGGGTGGCCAACTGATGGTGATAAGAATGCTAATGCCAAAAATGCAAAGAGGTTCAACCAAGGTTTCATTAAACATGCTCTGAGTGGTAATGGTACACCAAAGAGAAAAGGCATGATGGATTTTTATCTATTCAGTCTCATTGATGAGAATGATAAAAGTGTTGCTCCAGGCAACTTTGAGAGGCATTGGGGGATTTATGAGTTTGATGGAAAACCGAAGTATGAATTAGACATAAGAGGAAAACATAAGGAAAAGGGTCTTGTTTCTGTTGAAGGGATAAAGTACCTAGAAAAAAAATGGTGTGTTTTGGATCCAGAAGCTACTGATTTGGATGATTTGGGCAAAAATGTTGACTATGCTTGTAGCCATTCTGATTGTACAGCACTTGGATATCTCTGTAGTTGTAGTAATCTAAATGTTCAAGGGAATGCTTCATATGCTTTCAATATGTATTATCAAGTTAATAACCAGATGGATTGGGACTGTGATTTCTCTGGTTTGGCTATGGTTACACATGAGGATCCTTCAGAGAATGGCTGCAATTTCCCTTTGATGGTCGCTAGTGGTTCACGTGCAGGGCTTTCCAAGATCCTGATGAAAGCAATGGAGGTGTATTTTTTTGCTATGCTTTTGCTATAA 1461 0.3888 MAQENASNCIYLATFLIIFLTIISSSSAWVGVNWGTMTTHQLPPKKVVKMLKDNGFRKLKLFDADDTILTALMGTDIEVMVAIPNVMLSKISNSPMDADSWVYENVTAYLFRGGVNIKYVAVGNEPFLKAYNGSYLNKTLPALKNIQTSLNNAGLESKVKVTVPFNADIYYSPDSNPVPSAGDFRPELRDITIEIIQFLYSTNSTFTVNIYPFLSLYYGHDNFPFDFAFFDGKNEPLRDGKAVYNNVFDANLDTLMWALEKAGYPDLHVTVGEVGWPTDGDKNANAKNAKRFNQGFIKHALSGNGTPKRKGMMDFYLFSLIDENDKSVAPGNFERHWGIYEFDGKPKYELDIRGKHKEKGLVSVEGIKYLEKKWCVLDPEATDLDDLGKNVDYACSHSDCTALGYLCSCSNLNVQGNASYAFNMYYQVNNQMDWDCDFSGLAMVTHEDPSENGCNFPLMVASGSRAGLSKILMKAMEVYFFAMLLL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02253 486 Gene3D - 369 461 - -
Mepo6g02253 486 Gene3D Glycosidases 29 360 - -
Mepo6g02253 486 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 445 IPR044965 GO:0004553|GO:0005975
Mepo6g02253 486 FunFam Glucan endo-1,3-beta-glucosidase 5 29 358 - -
Mepo6g02253 486 SMART X8_cls 373 456 IPR012946 -
Mepo6g02253 486 FunFam Glucan endo-1,3-beta-glucosidase 8 369 465 - -
Mepo6g02253 486 Pfam X8 domain 373 443 IPR012946 -
Mepo6g02253 486 SUPERFAMILY (Trans)glycosidases 30 350 IPR017853 -
Mepo6g02253 486 Pfam Glycosyl hydrolases family 17 30 351 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02253 Mepo-Chr6 29163782 29166611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02253 30 460 Miscellaneous Gene Families AT2G19440 56.613 3.14e-178 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02253 - - gmx:100781894 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02253 6 29163782 29166611 Mepo6g02253 6 29163782 29166611 ECH