Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02147 ATGGCGAAATTGAAGATAGCAGGAACATGGTCAGGTGTATTAGAAGAAGTCGATTTAGAGAATTGGACCATTTCTTCATTACGTGAAGAAGTTGCGAAGCGATCCAATTGTGATAACCCTCACTTCATTAATCTCATTTGTGCTGGTAGAATTCTCAAGGATGATAATCAAACCCTAACCCTAACACAATTGGGTGTCAAAAATAACTCCAAGATTCTCGCTACTGTCACTTCTCCTCAACAGGGCCAGTCTCTTGTTGTTGAGGAACAAAGCTCTCATAGGCTTGCTCGTATTAGGGCAGCTGCAACTGCATTGGCGGAAAGGCATGCAGATGGTTCATTACCTCTTGAAGACTTTAACATAGAAGTTGAAGATCAAAGTGGACAGAAAGTACGCTTAGGATCAGAGATTGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAAGGGGAAGCGTTTTATCAGAAAGGGAAATTACAAAGATGCACTTGAAGTGCTTACCATGGGAGAGGAGTCATTCTCTATTTGTGATCCAAAAGTCATTGAGCTTATTGACAATGTTCCGATACTGCAAATTGACATGGTATGGTGCTACTTCATGCTACGGGACATTAGATGGTTATCAGATGCCGGAAAGCGCCTTGAAATGGCTAGGGCAGGAATTGAACGTGCTCATGGGAAGGATTCTCTCCGCCTCAGACTCTTACAAGGTGGTCGCTATCCAGAGCTTGCACTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATTTCATTCTGGCCAGTTCGAGAAATCAAGGCAAGCATTAGCCTCTGCAAAAGCGAAGTTTGTTCAGCTGCAAGTGCCAGATGAGGCCTTATCACTTGTTATGAGCATGGGCTACACTCAAAGGGATGCGAAGAGAGCACTGCGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGTTGAGGAGAAGGCAAAGAAAATGCAAAAAGACGAGGAAGATTTAAAAAGAAGAGATGAAATTAGGGAGCAAAAGCAGTATGGGGTGACCCCCTTAAAGAAGGCCGTGGATCTGGAGAGACTGAACGAATTGGTCACTATTGGGTTTGAGAAGGAGCTTGCTGCTGAAGCCCTTAGAAGAAATGAAAATGATACTCAGAAGGCATTGGATGATTTGACGAATCCAGAAACTAATTCTCATTTACAGGTTAAGATCGAATCAAGGAAAAGGAAAAGACAGCAACAAGCAAAAGATTCTGCAATTGAGAAAGTTGTGCAAATGGGTTTTGAAAGATCGAGAGTGGTCGCTGCTTTTGAAGAAGGCGGCAATTTAGAAGAAGTATTGCAAAGACTGACAGCACAACCTGAGGCGGAGAATATGCAACCTCAAGTTAATTCAACTGCTGCTTTTGATGGTATTGGAAGTTCATCTAACCCTTTACCAGAAAATGTTGGTTCTGATATTCCAGACCAAATGAATGAGGTTGAAGATCACAATAAAACTGAAGAAAGGGATGTGGAGATGGAAGATGAGCTTTCTGCAGATATAGCTAAAGGAGATGCCTTTACTGATTATGACATTGAAGTTAATATTGAAGGGGAAGCCATAACTGAGTACCTGTCTATGGTTGAGTCTGCAGGCATTGCTTCCAAATAA 1656 0.4263 MAKLKIAGTWSGVLEEVDLENWTISSLREEVAKRSNCDNPHFINLICAGRILKDDNQTLTLTQLGVKNNSKILATVTSPQQGQSLVVEEQSSHRLARIRAAATALAERHADGSLPLEDFNIEVEDQSGQKVRLGSEIDQRAVMMGLMLHAKGKRFIRKGNYKDALEVLTMGEESFSICDPKVIELIDNVPILQIDMVWCYFMLRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRLLQGGRYPELALHLRLELLEGVVAFHSGQFEKSRQALASAKAKFVQLQVPDEALSLVMSMGYTQRDAKRALRMNNQDVGGAIDFLVEEKAKKMQKDEEDLKRRDEIREQKQYGVTPLKKAVDLERLNELVTIGFEKELAAEALRRNENDTQKALDDLTNPETNSHLQVKIESRKRKRQQQAKDSAIEKVVQMGFERSRVVAAFEEGGNLEEVLQRLTAQPEAENMQPQVNSTAAFDGIGSSSNPLPENVGSDIPDQMNEVEDHNKTEERDVEMEDELSADIAKGDAFTDYDIEVNIEGEAITEYLSMVESAGIASK 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02147 551 Gene3D - 285 324 - -
Mepo6g02147 551 Gene3D - 358 395 - -
Mepo6g02147 551 SMART uba_6 357 394 IPR015940 -
Mepo6g02147 551 SMART uba_6 417 453 IPR015940 -
Mepo6g02147 551 SMART uba_6 285 322 IPR015940 -
Mepo6g02147 551 SUPERFAMILY UBA-like 277 324 IPR009060 GO:0005515
Mepo6g02147 551 SUPERFAMILY Ubiquitin-like 20 76 IPR029071 -
Mepo6g02147 551 MobiDBLite consensus disorder prediction 484 510 - -
Mepo6g02147 551 CDD UBA 361 390 - -
Mepo6g02147 551 MobiDBLite consensus disorder prediction 491 510 - -
Mepo6g02147 551 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 355 395 IPR015940 -
Mepo6g02147 551 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 2 546 IPR039749 -
Mepo6g02147 551 SUPERFAMILY UBA-like 346 394 IPR009060 GO:0005515
Mepo6g02147 551 MobiDBLite consensus disorder prediction 387 419 - -
Mepo6g02147 551 Gene3D - 14 84 - -
Mepo6g02147 551 ProSiteProfiles Ubiquitin domain profile. 23 81 IPR000626 GO:0005515
Mepo6g02147 551 MobiDBLite consensus disorder prediction 402 418 - -
Mepo6g02147 551 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 283 323 IPR015940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02147 - - gmx:100792972 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02147 6 25865251 25873280 Mepo6g02147 6 25865251 25873280 ECH