Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02127 ATGGGTTCTTGGATTCAGATTTTGTGTATATACTATTTGGCATGGTTCAGTTTTCTTGTTGTGAACACAGTGAGTGAAAGTGGTTATGATGAAGATGTGAAGAAAGGGAATGTTATGATTGATGGTAGTTCTGTGATTGGAAATATTGATGATGATTTTATTTGTGCAACTTTGGATTGGTGGCCTCCTCAGAAATGTGATTATGGTACATGTAGTTGGGGTCTTGCTTCTCTTCTCAATCTGGACCTCAACAACAAGATTTTCTTAAATGCTGTGAGAGCCTTTTCACCATTGAAACTGAGATTAGGTGGCAGTTTGCAAGATATGCTGGTATATGGGACTGATGATTACAACCAGCCATGTACTCCTTTTGTTAGAAACACGTCTGAAATGTTCGGATTCAGTCAAGGGTGTCTTCCAATGCCAAGATGGGATGAACTTAATCATTTCTTCCAAAAAGCAGGGGCTAAGATTATTTTTGGATTGAATGCTCTTTATGGAAAGTCGGTACATCATGGTTATACAGAAGGACCTTGGAACTATACCAATGCCGAATCATTTATTCAATACACTGTTGGAAAGAATTATGAAATTCATGGATGGGAACTTGGCAATGAATTGAGTGGGGGTGGAGTTGGAACAAGTGTCTCTGTAGATCAATATGCTTCTGATGTCATTGCTTTAAGAGACGTAGTTCACAATGCATATAAAGACGTTGAGCCTAAGCCAATAGTCATTGCGCCTGGAGGTTTCTTTGATGCAACGTGGTTTAAGGATTTTATAAGCAAATCTAATAAATCCGTGGATGTGGTCACACACCACATTTATAGCCTTGGACCAGGAGTTGATACGCACCTTGTGGAAAAAATTCTGAATCCTTCCTATCTTGATAGAGACAAAACTACATTCAATGGCCTGAAAAATGTTCTTGAAAGTACAGGAACCTCAGCAACAGCATGGGTTGGTGAGTCAGGAGGGGCTTATAACAGTGGCCATCATCTTGTATCCGATGCATTTGTGTATAGTTTCTGGTATTTGGATCAACTCGGTATGTCTGCTTCATATGACACTAAAACTTATTGCAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTCAATACCACCAATTTCCGTCCAAATCCAGACTACTATAGTGCTCTTCTTTGGCACCGACTCATGGGAAGGCGTGTACTATCAACTAGCTTCTCAGGAACAAACAAGATACGAGCTTACACGCACTGTGCAAAACAATCTAAAGGAATTACCATACTATTGATCAACCTGGACAACAGCACAACTATCGAAGCGACATTTAGCGATAGTAAGAGTTCCTTGCATAGAAAGATGCCTTATAATTCTAAAATAATGAAACTACCTCTTCAAAGTTCAGTTGAAAATTCAAGAGAAGAGTACCATCTAACTCCGCAGGGTGGAAATATACATAGCCAAGTCATGTTACTGAATGGAAATGTTTTAAGTGTAAACTCAGATGGTGATATTCCTCCTTTGAAGCCTCTATATGTAAGCTCATCAAAGCCAATAAGGGTTTCTCCTTTCTCAATTGTATTTTCTCATATACCTGATGCTGTTGTTCCAGCTTGCGGCTAG 1611 0.3929 MGSWIQILCIYYLAWFSFLVVNTVSESGYDEDVKKGNVMIDGSSVIGNIDDDFICATLDWWPPQKCDYGTCSWGLASLLNLDLNNKIFLNAVRAFSPLKLRLGGSLQDMLVYGTDDYNQPCTPFVRNTSEMFGFSQGCLPMPRWDELNHFFQKAGAKIIFGLNALYGKSVHHGYTEGPWNYTNAESFIQYTVGKNYEIHGWELGNELSGGGVGTSVSVDQYASDVIALRDVVHNAYKDVEPKPIVIAPGGFFDATWFKDFISKSNKSVDVVTHHIYSLGPGVDTHLVEKILNPSYLDRDKTTFNGLKNVLESTGTSATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSASYDTKTYCRQSLIGGNYGLLNTTNFRPNPDYYSALLWHRLMGRRVLSTSFSGTNKIRAYTHCAKQSKGITILLINLDNSTTIEATFSDSKSSLHRKMPYNSKIMKLPLQSSVENSREEYHLTPQGGNIHSQVMLLNGNVLSVNSDGDIPPLKPLYVSSSKPIRVSPFSIVFSHIPDAVVPACG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02127 536 FunFam heparanase-like protein 3 73 392 - -
Mepo6g02127 536 Pfam Glycosyl hydrolase family 79, N-terminal domain 36 350 IPR005199 GO:0016020|GO:0016798
Mepo6g02127 536 SUPERFAMILY (Trans)glycosidases 49 394 IPR017853 -
Mepo6g02127 536 PANTHER HEPARANASE-RELATED 24 535 - -
Mepo6g02127 536 Gene3D Glycosidases 70 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02127 Mepo-Chr6 25373244 25377782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02127 29 535 Glycoside Hydrolase AT5G61250 47.206 1.36e-179 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02127 K07964 - gmx:100791916 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02127 6 25373244 25377782 Mepo6g02127 6 25373244 25377782 ECH