Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02102 ATGGTTGAGAAATCTATGTGCCCTGATGAAGATTGTTGCTTATCTGTTTTGAAATCTTTGTTTTATGTGTTTCATGAAAAAGGGTTGTTGATGATGGTTCATGGGCATGTGGTGAAATTGGGTATGGATGCATTTGATTTGGTGGGAAACACTTTGATTGAGTTGTATGGTTTTTTGAATGGGAATGGATTGGTTGAAAGAAAATCTGTAACAAATTTAAATTTTTGGAATAATTTGATTTATGAGGCTTATGAAAGTGGGAAAATTGTGGAAAGTTTTGAATTGTTTTGTAGGATGAGAAAAGAGAATGTACAACCTAATTCAGTTACTTTGATTAATTTGTTAAGAGCTAGTGTTGAATCAAACTCGTTGAAGACGGGGAAAGTTCTTCATTCTTTGGTCGTTGTGAGTAATTTGTGTAAGGAACTAACTGTGAATACTGCATTGTTGTCAATGTATGCTAAGTTAGGTAGTCTAAAAGATGCAAGGTTGATGTTTGAGAATATGCCTGAGAAGGATGTTGTAGTTTGGAATATAATGGTTTCAGCGTATTCTGGGAGTGGTTGCCCTAAGGAATCGTTAAAACTTGTGTATTGTATGGTTAGGTCGGGGATTAGACCTGATATGTTCACGGCAATCCCCGCTATTTCTTCGATCACGAAGTTAAAGTCTAACGAGTGGGGGAAGCAATTGCATGCTCAAGTGATAAGAAACGGTTCAGATTATCAGGTTTCAGTTCATAATTCTCTCGTTGACATGTATTCCACGTGTGGAGACTTGAATTCGGCACGGAAGATTTTCGGTTTGATAAAGGACAAGACGGTGGTTTCGTGGAGTGCAATGATCAAAGGGTATGCAATACATGACAATTGTCTCGAGGCTCTTTCTCTGTTCATAGAGATGAAGTTGAGTGGTACTAAAGGTGACTTTGTAATAGTCATCAACATATTGCCTGTGTTTGCAAAGATAGGGGCATTGCATTATGTAAGATACTTACATGGTTACTCATTGAAAACCAATCTCGATTCACTCAAATCACTTAAGACATCGCTTCTTAGTAGCTATGCGAAATGTGGTTGTATAGAGATGGCAAGGAAGCTTTTCGATGAAGAGAAAAGCAGCCTTAAAGATATAATTGCATGGAACTCTATGATCACTGCATATTCTAACCATGGGGAATGGTTTCAATGTTTTGAGTTGTACAACCAAATGAAACTATCAATTGTTAAACCAGATCATGTAACATTTCTCGGGATGCTAACAGCTTGTGTTAATTCAGGCCTTGTGGAAAAAGGCAAGAAAATTTTCAAGGAGATGGTGGACATTTACGGTTTCCGACCTAGTAAGGAACACAATGCATGTATGGTTGATCTATTAGGACGCGCTGGAAAAATCGATGAAGCAAGAAAAATAATAGAAACTAATCGATTAAATTCAGATGCAAGGGTTTATGGCCCCTTGTTGAGTGCATGTAAGATGCATGATTTAGAAACCGATTTCGCAGAACTTGCTGCTGAGAAGCTCATAAAAATGGAACCTAAAAACCCTGCAAACTATGTGTTGCTATCCAATATATTTGCTGCAGCAGGGAAATGGGACAAAGTTGCTAAAATGAGGAGTTTTCTTAGAGATAGAGGACTAAAGAAAACACCAGGTTGTAGCTGGGTAGTGTTAGATGGACAATTTCATGAGTTTCGTGTTGCAGATCAATCTCATCCAAGATCAGAAGACATATATTCAGTTTTGAAAGTACTGGAGTTGAAAGCTGGCATGGAGGATGATGATCTCGAATTCTTTTTTGACCCGTCTATTATTTTGGCGATGCACAAGTCAGGTCAACTGAGGAAAGAGAGTCATGCAGAAATTGGAGGTGGTAATGATTGTCCTGAAATAAGGAAATGTGAGAAGGCAAGATTAAGAGAAATGCAGAAAAGTAAGAAGCAGAAAATTCAAGAAATATTGGATGCTGAAGATGCTTCCGTTGAAGCTAACAGGTCAGGACAAGAAAAATCATGTCCCTCCAAAATAGAGTGGAGTTTCAGCTCAGCTCTAAGGCCTGATGTATTTTACTGGGATAAGCCTGTGGTTTTTACATATGAAGAGGTTTTTGACTCAACCAACGGTTTCTCTGATTCAGATCTGTTATGA 2148 0.3808 MVEKSMCPDEDCCLSVLKSLFYVFHEKGLLMMVHGHVVKLGMDAFDLVGNTLIELYGFLNGNGLVERKSVTNLNFWNNLIYEAYESGKIVESFELFCRMRKENVQPNSVTLINLLRASVESNSLKTGKVLHSLVVVSNLCKELTVNTALLSMYAKLGSLKDARLMFENMPEKDVVVWNIMVSAYSGSGCPKESLKLVYCMVRSGIRPDMFTAIPAISSITKLKSNEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCGDLNSARKIFGLIKDKTVVSWSAMIKGYAIHDNCLEALSLFIEMKLSGTKGDFVIVINILPVFAKIGALHYVRYLHGYSLKTNLDSLKSLKTSLLSSYAKCGCIEMARKLFDEEKSSLKDIIAWNSMITAYSNHGEWFQCFELYNQMKLSIVKPDHVTFLGMLTACVNSGLVEKGKKIFKEMVDIYGFRPSKEHNACMVDLLGRAGKIDEARKIIETNRLNSDARVYGPLLSACKMHDLETDFAELAAEKLIKMEPKNPANYVLLSNIFAAAGKWDKVAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADQSHPRSEDIYSVLKVLELKAGMEDDDLEFFFDPSIILAMHKSGQLRKESHAEIGGGNDCPEIRKCEKARLREMQKSKKQKIQEILDAEDASVEANRSGQEKSCPSKIEWSFSSALRPDVFYWDKPVVFTYEEVFDSTNGFSDSDLL 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02102 715 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 377 411 IPR002885 -
Mepo6g02102 715 Gene3D Tetratricopeptide repeat domain 345 576 IPR011990 GO:0005515
Mepo6g02102 715 FunFam pentatricopeptide repeat-containing protein At1g11290, chloroplastic 346 584 - -
Mepo6g02102 715 FunFam Pentatricopeptide repeat-containing protein chloroplastic 226 327 - -
Mepo6g02102 715 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 173 207 IPR002885 -
Mepo6g02102 715 Pfam E motif 498 556 IPR046848 -
Mepo6g02102 715 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 30 592 IPR046960 GO:0003723|GO:0009451
Mepo6g02102 715 Pfam PPR repeat 349 370 IPR002885 -
Mepo6g02102 715 Pfam PPR repeat 76 104 IPR002885 -
Mepo6g02102 715 Pfam PPR repeat 247 273 IPR002885 -
Mepo6g02102 715 Pfam PPR repeat 276 305 IPR002885 -
Mepo6g02102 715 Pfam PPR repeat 175 205 IPR002885 -
Mepo6g02102 715 Pfam PPR repeat 147 173 IPR002885 -
Mepo6g02102 715 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 274 308 IPR002885 -
Mepo6g02102 715 Coils Coil 639 659 - -
Mepo6g02102 715 Pfam PPR repeat family 376 424 IPR002885 -
Mepo6g02102 715 NCBIfam pentatricopeptide repeat 414 441 IPR002885 -
Mepo6g02102 715 NCBIfam pentatricopeptide repeat 175 208 IPR002885 -
Mepo6g02102 715 NCBIfam pentatricopeptide repeat 380 412 IPR002885 -
Mepo6g02102 715 NCBIfam pentatricopeptide repeat 276 307 IPR002885 -
Mepo6g02102 715 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 72 106 IPR002885 -
Mepo6g02102 715 Gene3D Tetratricopeptide repeat domain 1 126 IPR011990 GO:0005515
Mepo6g02102 715 Gene3D Tetratricopeptide repeat domain 228 330 IPR011990 GO:0005515
Mepo6g02102 715 Gene3D Tetratricopeptide repeat domain 127 227 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02102 Mepo-Chr6 25031736 25036953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02102 32 623 Glycoside Hydrolase AT3G49170 22.951 1.74e-38 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02102 - - gmx:102669772 908.672