Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02076 ATGGAAGATAAGGGTATGGATCAAAATGAAGATGAATGTCGCAATGAAGGTGAAACTAACAACAAACAAGATGATGAGGAAGCTGTTGCTCACCTCGAAGAAATCAAGAAATCGATCGAGGCAAAAATGGCTTTACGTCAAACCAATTTGAATCCTGAGAGGCCTGACACGGGGTTTTTTAGGACCTTGGATTCCAGCATTAAGCGCAACACTGCAGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCAGCGTGAATCACTGATGGACGACTTGCGAAGTGTCAACTTAAGCAAATTTGTTAGTGAAGCAGTGTCAGCTATATGTGATGCAAAACTTAGGAGTTCTGATATACAAGCAGCAGTTCAGATATGCTCTTTGCTTCATCAAAGGTACAAGGATTTTGTGCCAACTCTGATTCAAGGACTTCTCAAAGTCTTCTCTCCTGGAAAATCTGGTGATGAAACAGATTCAGACAAAAACTTGAAGGCAATGAAGAAGCGCAGCTCTCTGAAACTTCTATTGGAACTTTTTTTTGTTGGGGTTATTGAAGATGGTGGCATTTTTATCAGTATCATAAAAGACCTTACCAGTGTGGAACAGCTGAAAGACCGGGAAGCTACGCAAACAAGTTTGACCCTTCTTTCTAGCTTTGCTCGGCAAGGAAGAATTTTTCTAGGACTTTCTGTTACTGGGCCAGAAATTCATGAAGAGTTTATGAAAGGCCTCAACATCACGGCAGATCAAAAGAAAGTTATCCGGAAAGCATGTTATTCGTTTTATGATACTGCAGCAGAACTACTTCAGTCTGAGCATTCTTCACTTCGATTAATGGAACATGAAAATTCTAAGATTTTGAATGCAAAAGGAGAGCTAAGCGAAGAAAATCTCTCTTCATATGAAAAACTTCGTAAATCCTATGACCATTTGTACCGTAATGTCTCATCATTAGCTGAAGCACTTGATATGCAGCCTCCTGTAATGCCAGAGGATGGCCACACAACAAGGGTTACTAGTGGTGAGGAGGCTGTTTCTTCTGCTGCTGGGAAAGATTCTTCTGTTGTTGAACCCATATGGGACGATGAAGACACAAGGGCTTTTTATGAATGTTTACCTGATCTTAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGGAGCCAAAAGTTAATGAGCAATCTGTGAAGGGTCAAGACCAACTAACCGAAATATTACCTGAATCAGACAAAAGTCAACTGATCACCCTTGATAGTGGAGAGGTCTCCACAGAATCTAATGTTTTACCTGAGGGAGAAAGCTCAGAGAGAGTGAATGATAAAGAAGAAAAAGAAAAGTCTAAAGAGTTGGACAGAGACAAGGAAAAAGAAAAAGAAAAAGAAAGTGAAAAAAAGGGGGAACATGAAAAAGAAAAACTCAGAAGTCTTGAAGGAACAAATTTGGATGCTCTATTGCAGAGGCTTCCGGGTTGTGTGAGCCGGGACCTTATAGATCAATTAACAGTAGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTTGTGAGGGCTTTGTTCAGTGTACCAAGGACTTCTCTAGAACTGCTTGCGTATTACTCTCGCATGGTTGCTACACTCTCAACTTGTATGAAGGATGTCTCCTCCCTTCTATTGCAGATGTTGGAGGAGGAATTCAATTTCTTAATAAATAAAAAGGACCAGATGAATATTGAGACAAAGATCAGGAATATCAGGTTTATTGGAGAACTTTGCAAGTTCAAAATTGCCCCTGCTGGCCTGGTCTTCAGTTGTTTGAAGGCCTGTTTAGATGATTTTAGTCATCACAACATTGATGTAGCTTGCAACCTTCTTGAAACATGTGGCCGTTTTCTGTATCGGTCTCCAGAAACTAGTATACGTATGGGTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTTAAAAACTTGGATCCTAGACATAGCACTTTGGTGGAGAATGCATACTACCTTTGCAAGCCACCTGAAAGATCTGCACGAGTAGCTAAAGTCCGTCCTCCGTTGCATCAGTATATCAGAAAGTTACTTTTCTCTGATCTTGACAAGACGACCATTGAGCATGTGCTGAGGCAACTTCGTAAATTACCATGGAGTGATTGTGAACTGTATCTTTTAAAATGCTTCATGAAGGTTCATAAAGGAAAGTATGGTCAGATCCACCTGGTTGCATCTCTTGCTGCTGGGTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAGTTGATGAGGTTTTGGAGGAAATTAGAATTGGGTTGGAACTAAATGACTATGGGATGCAACAAAGACGCGTTGCAAACATGCGATTTTTAGGAGAGCTTTACAACTACAAGCATGCTGACTCATCTGTTATTTTTGAGACATTGTATCTCATTATTGTCTTTGGCCATGGAACACCTGAGCAAGATGTACTCGATCCACCTGAAGATTTTTTCCGTATAAGGTTGATCATTACTCTACTTGAAACTTGTGGCCATTACTTTGATCACGGCTCTTCTAAGAAAAAGCTTGATCGGTTCCTGATGCACTTCCAACGGTATATTTTAAGCAAAGGTGCACTGCCTCTGGATGTTGAATTTGACTTGCAGGATCTGTTTGCGGACTTGCGTCCCAGTATGGTCCGTTACACTTCTGTTGATGAGGTGAATGCAGCTCTAGTGGAACTTGAGGAGCACGACCGAATAGTTTCTACTGATAAGGCTATTAGTGAAAAACATTCCCACACTGATAAGCCCTTAAGTAGGAGCACTTCCACCACGATGGCCAGCAATGGACAGAACAATGATAATGGCATTGAGGAAAATGGAGTGCAAGACAATGTCAACGAAGGTGAGCATGACTCAGGGAGTGACGTAATTGATGCAGAAGGACATGATGATGAAGAGTTGGATGAGGAGAATCATGATGATGGGGGTGAGACTGAGGATGACGATGAGGATGAGGACGGACCTGCTTCTGATGATGAAGATGAAGTCCATGTGAGACAGAAGGTGACAGAAGTCGACCCATTAGAAGAAGCTGATTTTGATCAGGAGCTCAAGGCTGTCGTACAGGAAAGTATGGAACAGCGACGACTGGAGCTACGGGGCCGTCCTACATTGAACATGATGATTCCAATGAATGTATTTGAAGGTTCGGCCAAGGATCATCATGGGAGAGGAACTGGTGGGGAAAGTGGTGACGAAGCCTTAGACGAGGATACTGGCGTAAGCAAGGAGGTTCAGGTGAAAGTTCTGGTGAAGCGTGGTAACAAGCAACAAACGAAGCAGATGTACATCCCCAGTGATTCCTCACTGGTGCAGAGTACGAAACAGAAAGAAGCAGCTGAGCTTCAGGAGAAAGAAGACATTAAGAGGCTTATCTTGGAGTATAATGATAGAGAAGAGGAAGAGCTTAATGGATTGGGGGCCCAACCTTCAAACTGGATGCAAAGTGGAGGTAACAAGGTTGGTGGTCGTGGCAACTCTTTTGAAGGAACCAGTGGCAGGGGTGGTGGATCACGGCATCGGCATCATCACTACTATACTGGTGGTGGGATCTACTATAGCAGAAGAAGGTGA 3600 0.4222 MEDKGMDQNEDECRNEGETNNKQDDEEAVAHLEEIKKSIEAKMALRQTNLNPERPDTGFFRTLDSSIKRNTAVIKKLKQINEEQRESLMDDLRSVNLSKFVSEAVSAICDAKLRSSDIQAAVQICSLLHQRYKDFVPTLIQGLLKVFSPGKSGDETDSDKNLKAMKKRSSLKLLLELFFVGVIEDGGIFISIIKDLTSVEQLKDREATQTSLTLLSSFARQGRIFLGLSVTGPEIHEEFMKGLNITADQKKVIRKACYSFYDTAAELLQSEHSSLRLMEHENSKILNAKGELSEENLSSYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAVSSAAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKVNEQSVKGQDQLTEILPESDKSQLITLDSGEVSTESNVLPEGESSERVNDKEEKEKSKELDRDKEKEKEKESEKKGEHEKEKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSLELLAYYSRMVATLSTCMKDVSSLLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETSIRMGNMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKTTIEHVLRQLRKLPWSDCELYLLKCFMKVHKGKYGQIHLVASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVANMRFLGELYNYKHADSSVIFETLYLIIVFGHGTPEQDVLDPPEDFFRIRLIITLLETCGHYFDHGSSKKKLDRFLMHFQRYILSKGALPLDVEFDLQDLFADLRPSMVRYTSVDEVNAALVELEEHDRIVSTDKAISEKHSHTDKPLSRSTSTTMASNGQNNDNGIEENGVQDNVNEGEHDSGSDVIDAEGHDDEELDEENHDDGGETEDDDEDEDGPASDDEDEVHVRQKVTEVDPLEEADFDQELKAVVQESMEQRRLELRGRPTLNMMIPMNVFEGSAKDHHGRGTGGESGDEALDEDTGVSKEVQVKVLVKRGNKQQTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGAQPSNWMQSGGNKVGGRGNSFEGTSGRGGGSRHRHHHYYTGGGIYYSRRR 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02076 1199 Gene3D - 441 674 - -
Mepo6g02076 1199 FunFam Regulator of nonsense transcripts UPF2 19 329 - -
Mepo6g02076 1199 Pfam MIF4G domain 484 668 IPR003890 GO:0003723|GO:0005515
Mepo6g02076 1199 Pfam MIF4G domain 686 880 IPR003890 GO:0003723|GO:0005515
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 391 432 - -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 1059 1080 - -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 1 29 - -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 1162 1199 - -
Mepo6g02076 1199 Pfam Up-frameshift suppressor 2 1001 1136 IPR007193 -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 911 1008 - -
Mepo6g02076 1199 SUPERFAMILY ARM repeat 478 672 IPR016024 -
Mepo6g02076 1199 Gene3D - 679 909 - -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 967 1000 - -
Mepo6g02076 1199 SMART if4_15 67 289 IPR003890 GO:0003723|GO:0005515
Mepo6g02076 1199 SMART if4_15 481 669 IPR003890 GO:0003723|GO:0005515
Mepo6g02076 1199 SMART if4_15 684 885 IPR003890 GO:0003723|GO:0005515
Mepo6g02076 1199 SUPERFAMILY ARM repeat 679 904 IPR016024 -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 911 925 - -
Mepo6g02076 1199 Coils Coil 552 572 - -
Mepo6g02076 1199 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 24 1146 IPR039762 GO:0000184
Mepo6g02076 1199 Gene3D - 19 329 - -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 433 472 - -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 926 950 - -
Mepo6g02076 1199 Coils Coil 437 459 - -
Mepo6g02076 1199 Gene3D - 1090 1114 - -
Mepo6g02076 1199 FunFam Regulator of nonsense transcripts UPF2 439 677 - -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 389 472 - -
Mepo6g02076 1199 MobiDBLite consensus disorder prediction 952 966 - -
Mepo6g02076 1199 FunFam Regulator of nonsense transcripts UPF2 680 910 - -
Mepo6g02076 1199 SUPERFAMILY ARM repeat 83 204 IPR016024 -
Mepo6g02076 1199 Coils Coil 22 42 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02076 K14327 - gmx:100786092 1915.58