Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02068 ATGGCTTGTGTGAAATTGGGTTCTAAAGCTGATGCATTTCAGCGTCAGGGTCAAGCCTGGTTCTGTACGACTGGGCTTCCCAGCGATATAGTTGTTGAAGTTGGTGAGATGTCTTTCCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGCGGAGTTTTGGAAAGATCAATTGCCAAAGCTTCTGAATCAGAGGAAGAATGTGTCATACACCTTCACGACATTCCTGGTGGGGCCAAAACATTTGAACTCGTTGCAAAATTCTGCTACGGCGTAAAACTCGAACTTACGGCATCAAATGTTGTGTGCCTATGGTGTGCTGCCGAGCATCTTGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCCCAAGCCGAAACCTTTTTCAATCAAGTGGTCCTCCGAAGTTGGAGAGACTCCATGAGGGCACTTCAAACCTGTGACGATGTTCTGGACCAAGCTGAAGAGCTACACATTGTGAAGAGGTGCATTGAATCGCTTGCAGCAAAGGCATCCACTGACCCAAATTTATTTGGGTGGCCGGTATTGGAGCGTGGTGGTCCCTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAGAATACAACTTTAGATTGGTGGTACGAGGATGTAGCAAATTTGAGTTTACTGATTTATAAGAGGTTGATAGCTGTCATGGAATCTCGGGGCATTAGGCAGGAAATCATTGCCGGTTCTCTTGCTTTCTATGCTAAAACGTATTTGCCTGGTTTAAATCGACGTAAGGTTTCCGGTGAGTCCAGTACCCGACTTACCCCGGCGGCTTCGTTATCTCCACCATCTGAAGAAGATCAAAAAATTCTTCTGGAAGAGATTGATCAACTACTCCCAATGCAGAAGGGCCTGGTCCAAACGAAGTTCCTGTTTGGTCTACTTCGAACGGCCATGATTCTACGGGTGAACCCCTCTTGCATATCAAGTTTGGAGAAACGGATCGGGATGCAGCTTGATCAAGCTGCTTTGGAAGATCTCTTGATGCCAAATTTCTCGTATTCAATGGAGACACTTTACAATGTTGACTGCGTGCAAAGAATTCTTGATCATTTCCTTGCCATGGATCAGATTACAGGTGGTGCGTCTCCATGCTCAATTGATGAAGATGGCCAGTTGATCGGATCACCTTCGCTGACACCCATTACCATGGTGGCAAAACTGATTGATGGTTACCTGGCAGAGGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTTCAAGCCCTTGCTGCGGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATATCGTGCTATAGATATTTATTTGAAGTCTCACCCATGGTTGGTGGAGGCAGAAAGAGAGCAACTATGCAGGCTAATGGACTGCCAGAAGCTCTCATTAGAAGCATGCACCCACGCTGCACAGAATGAAAGGCTCCCCATTAGAATCATAGTTCAAGTTCTATTTTTCGAGCAGCTCCAGCTTCGTACTTCAATAGCTGGTTGTTTTCTAGTATCAGACAATCTCGATGGATCAAGAAATTTAAGAAGTGGTTTAGTTGGATCCAACGAGGGTGGGTGGGTGTCAGCAGTCAAGGAAAATCAGGTATTGAAAGTGGGGATGGATAACATGAGGATGAGGGTATCTGAGCTCGAGAAAGAGTGCTCAAACATGAGGCAAGAGATTGAGAAACTTGGTGGTAAGGCAAAGGGATCATCAACAAGCGCTTGGGGAGTTGTGTCAAAGAAACTCGGGTTTAAGATAAAGTCTCAAATGTGTAGTGCTCAAGAAGGATCTGTTAGCAAACAGAACAATGGACATAATAATGTTGAGAAGTTGAAGGACAGACATGTAAAGCATAATAGAAGTTCTTCTATTAGTGACAAAGGATCAGTCTCTTCAATTATTCCTTCTTAG 1944 0.4465 MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERSIAKASESEEECVIHLHDIPGGAKTFELVAKFCYGVKLELTASNVVCLWCAAEHLEMTEEYGEGNLISQAETFFNQVVLRSWRDSMRALQTCDDVLDQAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNTTLDWWYEDVANLSLLIYKRLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRKVSGESSTRLTPAASLSPPSEEDQKILLEEIDQLLPMQKGLVQTKFLFGLLRTAMILRVNPSCISSLEKRIGMQLDQAALEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQITGGASPCSIDEDGQLIGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVEAEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRNLRSGLVGSNEGGWVSAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGGKAKGSSTSAWGVVSKKLGFKIKSQMCSAQEGSVSKQNNGHNNVEKLKDRHVKHNRSSSISDKGSVSSIIPS 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02068 647 CDD BTB_POZ_NPY3-like 19 122 - -
Mepo6g02068 647 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Mepo6g02068 647 PANTHER OS12G0117600 PROTEIN 22 599 IPR043454 -
Mepo6g02068 647 Pfam NPH3 family 213 479 IPR027356 -
Mepo6g02068 647 Gene3D Potassium Channel Kv1.1; Chain A 11 131 IPR011333 -
Mepo6g02068 647 Coils Coil 543 577 - -
Mepo6g02068 647 ProSiteProfiles NPH3 domain profile. 213 503 IPR027356 -
Mepo6g02068 647 MobiDBLite consensus disorder prediction 605 647 - -
Mepo6g02068 647 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Mepo6g02068 647 SUPERFAMILY POZ domain 16 114 IPR011333 -
Mepo6g02068 647 MobiDBLite consensus disorder prediction 617 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02068 Mepo-Chr6 24506249 24511300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02068 8 573 EF-hand Containing Proteins AT3G44820 48.976 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02068 - - psat:127075654 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02068 6 24506249 24511300 Mepo6g02068 6 24506249 24511300 ECH