LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g02066	ATGGAGGAAGAAGAAAGCGAGAAGAGAACAGTGAGAATATTCGTCGGAGGATTAGGCGAAACCGTAACCTCCGATGATATTCGCAAGCTCTTCGAGTCATTGGGTAGCGTTCAATCACTCGAAACCATTCGTACAAAAGGTCGCAGTCTCGCTTACCTTGATTTCCTTGCTGATCCTAAATCCCTTTCCAAACTTTTCAGTAAGTACAATGGGTGTGTGTGGAAAGGTGGAAAGCTGAAACTTGAAAAGGCCAAAGAGCATTACCTTGATCGTTTGAAAAAAGAATGGGAAGAAGACGCAATTCTTAGTAGCGAACCACCAGCTACTGATGTTTCTACTCTTAAGGAGGATTTGGCAAAGGAAAAGCCTAATCCAAGACGCTTTGTAGATCCAGATGCAAAGCCTCTCAATATTTTCTTCCCAAGATTAAGAACGGTTAAATCCATACCATTCAGTGGAACAGGCAAGCACAAATACAGTTTCCAGAATATTAAAGTTGGTCCTCTCCCTGTGCATTTTTGTGATTGTGAGGAACATTGCAGTCCTTTTATCACAAAAAAGGAAAAGTTATCTATGAATGGAGAAGCTGAAAGGGAAAAGTTGTCTATCAGTGGGGAAGCAGAAATTGGTGGAATAAATGATGAAGAAATTAACATAATGAATGCTGTGATGAACAAGCTTCTTGAAAAAGAAAAGGTTTCTAACACCAAGCATCTTGGAAAGAAGCACAATTCTCTTGAATCTCTCAATGCTTTTCATTCTAATGAATTTGAAGTAGACAGTGCAACAGATGATGGTGATGATGATGATGATGATCTCATAACCAACATTGCAACAAAGAAAAATAAAGCAGCTTTGACAGGGACCCAAGAACTTGAAAGGATCATGGAAAGTCAGGAATGGTCCAATAAAACAAATATTGCAGAGGAAGAACCCATTGAAGCGCAAAAAAGGAGCAAGAGCAATTCTAACAAGGTTAAGAAGAGAAAATCGGAAAGTGAAAGCAATGGGGCTGCGTCTAGTACCCCTGTAGGCAAGAGTAAAATGCAGACTCTTGTAGATGAGGTGGGATCTGGTGCAAAGCCTACTGAACCAGAATATGATTTTGGGGAGTCGGCCAAAGTTTCATGGTCTCAAAAGTCTTCGTGGAGAGAACTTGTTGGTAAAGGAGGCAATGCTTCATTCAGTGCCTCTCTCATATTGCCGAAGTTTGATTCTGCTGAAGATGAGCAAAACTCTGATGGTTCTCACACTTCCTCGTCTACAAATGATGAAACTGAAGACATGGAAAGCGATGAATACCCAGATAGCGAGCCTACCAATACAAAAGTGATAGAAGAGCCTGCCGAATCTCAACCTACCAATACACAAGTGATTAAAGAACATGCTGATGCTCAACCTACCAATACAAGAGTGATAGAAGAGCCTGCTGAATCTCTGCCTAGCAATGCACAAGTGATAGAAGAACCTGCTGAAGCTCAACCTACCAATAAACAAGGGATAACTGAACCTGCTGAAACTCAGCATAACATAGCACCAAAAATAACTGGCACAGGTGTTTCATGGTGGCAAAAGAAATCTTGGACCCAGTTGGCTAATGAGAATAACAGTCCATTTAGCCTTTCACAACTTTTGCCTGACATTAGTTTCCCAGAACAAACGGCTAAAGAACCCATTTTGTACCCTGCCGGTTCCAGTGAGTGCAAGCATAATGGTGCTGATAAGAATACTGTTGATGGAACTGTCACTGATGGCTTCAACTTAGGGGAGATTGTACCAGAGAATAGTGAGCATGCTGGTACTGATGATATAGTTTCTGCTCCAGTAGTTGAGAAAATCGTTGAAACAAGTCCAAGGGAACGATCTGCAAATGTTAAAATAGGAGAAACTTGCTCATTTATGAGAAGTGCTGATTCTTTGAAAGAATGGAAAAAAGCTAAAGCCGCTGTTAGTGGATCGCTCAAAAGAAAACGCGGTGAGAAGAAGTAA	1989	0.4108	MEEEESEKRTVRIFVGGLGETVTSDDIRKLFESLGSVQSLETIRTKGRSLAYLDFLADPKSLSKLFSKYNGCVWKGGKLKLEKAKEHYLDRLKKEWEEDAILSSEPPATDVSTLKEDLAKEKPNPRRFVDPDAKPLNIFFPRLRTVKSIPFSGTGKHKYSFQNIKVGPLPVHFCDCEEHCSPFITKKEKLSMNGEAEREKLSISGEAEIGGINDEEINIMNAVMNKLLEKEKVSNTKHLGKKHNSLESLNAFHSNEFEVDSATDDGDDDDDDLITNIATKKNKAALTGTQELERIMESQEWSNKTNIAEEEPIEAQKRSKSNSNKVKKRKSESESNGAASSTPVGKSKMQTLVDEVGSGAKPTEPEYDFGESAKVSWSQKSSWRELVGKGGNASFSASLILPKFDSAEDEQNSDGSHTSSSTNDETEDMESDEYPDSEPTNTKVIEEPAESQPTNTQVIKEHADAQPTNTRVIEEPAESLPSNAQVIEEPAEAQPTNKQGITEPAETQHNIAPKITGTGVSWWQKKSWTQLANENNSPFSLSQLLPDISFPEQTAKEPILYPAGSSECKHNGADKNTVDGTVTDGFNLGEIVPENSEHAGTDDIVSAPVVEKIVETSPRERSANVKIGETCSFMRSADSLKEWKKAKAAVSGSLKRKRGEKK	662

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g02066	662	Pfam	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	13	55	IPR000504	GO:0003723
	Mepo6g02066	662	SMART	rrm1_1	12	82	IPR000504	GO:0003723
	Mepo6g02066	662	MobiDBLite	consensus disorder prediction	310	334	-	-
	Mepo6g02066	662	CDD	RRM_NOL8	12	85	IPR034138	-
	Mepo6g02066	662	SUPERFAMILY	RNA-binding domain, RBD	7	85	IPR035979	GO:0003676
	Mepo6g02066	662	PANTHER	TRANSCRIPTIONAL REGULATOR	501	660	-	-
	Mepo6g02066	662	MobiDBLite	consensus disorder prediction	297	389	-	-
	Mepo6g02066	662	Gene3D	-	1	89	IPR012677	-
	Mepo6g02066	662	MobiDBLite	consensus disorder prediction	402	469	-	-
	Mepo6g02066	662	MobiDBLite	consensus disorder prediction	490	513	-	-
	Mepo6g02066	662	MobiDBLite	consensus disorder prediction	444	464	-	-
	Mepo6g02066	662	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	11	86	IPR000504	GO:0003723

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g02066	-		-	tpra:123883670	953.355

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo6g02066	6	24486624	24491909	Mepo6g02066	6	24486624	24491909	ECH