LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g01989	ATGGCTGCAAAGAAAGCCATTGAAACATTCTCCAAAAGCTTGATAGAAGAAGTACACAAATGGGGTTGTTTCAAACAAACTGGTGTGAGTTTAAGATACATGATGGATTTTGGTTCTAAACCAACTTCAAAGAATTTGTTGATTTCTGCGCAGTTTCTTCATAAGGAACTTGCCATTAGAATTGCTAGAAGAGCTGTTGAACTTGAAAGGCTTCCTTGTGATTTGTCACAAAAACCTGCTGTTTTGAAGGTTAGAGATTGGTACTTGGATTCATTCCGCGATATTAGATCCTTTTCTGAGATCAAGAACATGAATGATGAAAAAGAGTTCACTGAAGTGATCAAGGCCATAAAAGTGAGACACAACAATGTGGTACCTACAATGGCCTTAGGTGTTCAGCAATTGAAAAAAGATGTGGACCCGAAGATTATTAATCAGGATTTTGTTGAGATTCATCAGTTCCTTGATCGTTTTTACATGTCGAGAATCGGAATCCGAATGCTCATAGGACAGCATGTTGAGTTGCACAGTCCAAATCCTCCTCCTCATGTCGTAGGTTATATACATACAAGAATGTCTCCGGTGGAGGTAGCAAGGAATGCCGTTGACGATGCACGCTCTATATGCTCTCGTCAATATGGAAGTGCCCCTGATGTACATATCTACGGTGATCCTGATTTTACTTTTCCGTATGTTCCAGCTCACTTGCATCTTATGGTATTTGAGTTGGTTAAGAACTCTTTGCGTGCTGTCGAAGAGCGTTACATGAATTCCGACAAAGATCCACCTCCCATAAGAATAATAGTTGCTGATGGATTAGAGGATGTGACCATAAAGATTTCGGATGAGGGAGGTGGAATACCAAGAAGTGGTCTGCGAAAGATTTTTACATATCTGTATAGTACTGCTAGAAATCCATTGGATGAGCATGCGGATCTTGGAGTTGGCGATAATGTGACAATGGCTGGATATGGATATGGTCTTCCTATTAGTCGTCTATATGCTCGGTATTTTGGTGGCGATCTTCAAATAATCTCGATGGAAAATTATGGGACTGATGCATATCTACATCTATCTCGTTTGGGAGATTCACAAGAGCCATTACCTTGA	1110	0.4027	MAAKKAIETFSKSLIEEVHKWGCFKQTGVSLRYMMDFGSKPTSKNLLISAQFLHKELAIRIARRAVELERLPCDLSQKPAVLKVRDWYLDSFRDIRSFSEIKNMNDEKEFTEVIKAIKVRHNNVVPTMALGVQQLKKDVDPKIINQDFVEIHQFLDRFYMSRIGIRMLIGQHVELHSPNPPPHVVGYIHTRMSPVEVARNAVDDARSICSRQYGSAPDVHIYGDPDFTFPYVPAHLHLMVFELVKNSLRAVEERYMNSDKDPPPIRIIVADGLEDVTIKISDEGGGIPRSGLRKIFTYLYSTARNPLDEHADLGVGDNVTMAGYGYGLPISRLYARYFGGDLQIISMENYGTDAYLHLSRLGDSQEPLP	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g01989	369	FunFam	[Pyruvate dehydrogenase (Acetyl-transferring)] kinase mitochondrial	191	368	-	-
	Mepo6g01989	369	FunFam	[Pyruvate dehydrogenase (Acetyl-transferring)] kinase, mitochondrial	6	183	-	-
	Mepo6g01989	369	SUPERFAMILY	alpha-ketoacid dehydrogenase kinase, N-terminal domain	16	179	IPR036784	-
	Mepo6g01989	369	Gene3D	-	4	183	IPR036784	-
	Mepo6g01989	369	SMART	HKATPase_4	231	362	IPR003594	-
	Mepo6g01989	369	Gene3D	-	191	368	IPR036890	-
	Mepo6g01989	369	PANTHER	PYRUVATE DEHYDROGENASE KINASE	8	369	IPR039028	GO:0004672
	Mepo6g01989	369	Pfam	Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase	28	189	IPR018955	-
	Mepo6g01989	369	SUPERFAMILY	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	187	358	IPR036890	-
	Mepo6g01989	369	Pfam	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	234	359	IPR003594	-
	Mepo6g01989	369	CDD	HATPase_PDK-like	193	359	-	-
	Mepo6g01989	369	ProSiteProfiles	Histidine kinase domain profile.	236	362	IPR005467	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g01989	Mepo-Chr6	23363171	23367220	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g01989	K00898		-	gmx:100814079	674.855