Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01988 ATGGCTCCAATACGCTCCACGGGATATGTTGATCCTGGTTGGGATCATGGCATTGCTCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTACTGTGGGAAAATTGTTAGTGGTGGGATATACAGATTAAAGCAGCATTTAGCACGAGTTTCTGGTGAAGTAACATACTGTGAAAAGGCTCCAGAGGAAGTCTACCTAAAAATGAAGGAAAATTTGGAAGGGTGCCGTTCAAATAAGAAACAAAAGCAAGTTGATGCACAAGCATATATGAATTTTCAGTCTAATGATGATGAAGACGATGAAGAGCAAGTTGGGTGTAGAAGCAAAGGGAAGCAATTGATGGATGGCAGGAATGTATCTGTAAATTTAACTCCTCTGCGGTCCTTAGGATATGTTGACCCAGGGTGGGAACACGGTGTTGCTCAGGATGAGAGAAAGAAAAAAGTCAAATGCAGTTACTGTGAGAAAGTTGTTAGTGGCGGTATTAATAGATTTAAACAACATTTGGCTAGGATTCCTGGAGAGGTAGCGCCTTGTAAAAGTGCTCCAGAAGAAGTTTATCTTAAAATAAAAGAGAATATGAAATGGCATCGCACTGGAAAGAGACATAGGCAACCTGAGGCTAAGGATCTGATGCCTTTCTATCCAAAGTCTGATAATGAAGATGATGAGTATGAGCAGCAGGAAGATACTTTGCATCATATGAACAAGGAAGCTTTGATTGATATTGATAGGAGATACACTAAAGATACAGGAAAGACCTTTAAGGGAATGTCCTCTAATACTAGCCCAGAACCAGCGTTAAGAAGATCAAGATTAGATAGTTTTTACTTGAAACCTTCCACGAATCAGAATCTTCAAACTTGCAAACAACTAAAAGTTAAGACAGGACCCACTAAGAAATTACGCAAGGAACTTTTTTCTTCAATTTGCAAGTTCTTTTGCCATGCAGGAATTCCTTTACAAGCTGCAGATTCCGTATATTTTCATAAAATGCTGGAATTGGCTGGTCAATATGGACAAGGACTGGCATGCCCATCCAGCCAACTTATTTCGGGTCGCTTTTTGCAGGAGGAAATCAATTCCATTAAGAATTACCTTGCTGAATATAAGGCTTCCTGGGCCATCACTGGTTGTTCGATAATGGCTGATAGTTGGAGAGATGCACAGGGTAGGACAATTATTAACTTTCTTGTTTCATCTCCTCATGGTGTATACTTTGTTTCTTCAGTTGATGCCACTAATGTTATAGAAGATGCAACATATTTATTTAAGCTTTTGGACAAAGTAGTGGAAGAAATAGGTGAGGAAAATGTAGTGCAGGTAATAACCGAAAATACTCCTAACTATAAAGCTGCTGGGAAAATGCTTGAAGAAAGGAGAAGGAATTTGTTCTGGACGCCTTGTGCTATCTATTGTATTAATCAGGTGCTTGAAGATTTTCTGAAGATTAGATGTGTAGAAGAGTGCATGGAAAAGGGGCAGAAAATTACGAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAGTGAATTTACCCATGGAAATGAGCTTCTAAAGCCAGCTGGCACCCAGTGTGCTTCTAGCTTTGCTACATTGCAGAATTTGTTGGATCATCGAGTTAGTCTCAGAAGAATGTTTCTTTCAAACAAATGGATGTCATCCAGGTTCTCCAGTTCAAGCCAGGGGAAAGAGGTGCAAAAAATTGTTTTGAATGTTACATTTTGGAAGAAAATGCAGTATGTGAGGAATTCAGTATATCCCATATTGCAAGTGTTTCAAAAGATGTCTAGTGGTGAGAGCTTGTCAATGCCATATGTATATAACGACTTGTACAGGGCAAAACTTGCAATCAAAACTATTCATGGCGATGATGCACGGAAATATGAGCCATTCTGGAAGGTGATAGACAGGCACTGTAACTCTCTCTTTTGTCATCCTCTTTACTTGGCTGCTTACTTCTTGAATCCGTCATACCGATATCGTCAAGATTTTGTTTCGCATTCTGATGTAGTACGTGGTCTGAATGAATGCATTGTTCGGCTAGAACTAGATAATATGAGACGAATATCTGCATCAATGCAAATTCCTCATTATAATTCAGCTCAAGATGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGGTCTTGAACCAGCTGCTTGGTGGCAACAACATGGAATAAGTTGCTTGGAGTTACAAAGAATAGCCGTTCGCATATTAAGTCAGACATGCTCGTCCTTTGCATGTGAGCATGATGGGAGCATGTATGATCAGATATATAGCAAAAGAAAAAATCGCCTATCACAGAAGAAACTCAATGACATTATGTACGTTCACTACAATTTGCGGCTTAGAGAATGCCAAGTAAGAAAAAGGTCAAGGGAGTCAAAGTCAACCTCTGCTGAGAATGTTCTACAAGAGCACTTACTTGGTGACTGGATAGTTGATACCACTGCACAAAGCTCTGATAGTGACAAGAATATCTCTTTTGGTGTTGAACTGGACGATGAATATGAAAATGATTCAATAGACTATGACGATGGATCTGAAAGGCATCTAAAGGGTTCGCATGAGCTGGTTACTATGGCTGATGGAGCAGTAGGATCTTCAGATGCAGATCATGCTAACATTGATGGTGCCAGTGACGATGAGTCGGATCTGAATTATTTTGATGATGATATGAGTGAGTAA 2706 0.3932 MAPIRSTGYVDPGWDHGIAQDERKKKVRCNYCGKIVSGGIYRLKQHLARVSGEVTYCEKAPEEVYLKMKENLEGCRSNKKQKQVDAQAYMNFQSNDDEDDEEQVGCRSKGKQLMDGRNVSVNLTPLRSLGYVDPGWEHGVAQDERKKKVKCSYCEKVVSGGINRFKQHLARIPGEVAPCKSAPEEVYLKIKENMKWHRTGKRHRQPEAKDLMPFYPKSDNEDDEYEQQEDTLHHMNKEALIDIDRRYTKDTGKTFKGMSSNTSPEPALRRSRLDSFYLKPSTNQNLQTCKQLKVKTGPTKKLRKELFSSICKFFCHAGIPLQAADSVYFHKMLELAGQYGQGLACPSSQLISGRFLQEEINSIKNYLAEYKASWAITGCSIMADSWRDAQGRTIINFLVSSPHGVYFVSSVDATNVIEDATYLFKLLDKVVEEIGEENVVQVITENTPNYKAAGKMLEERRRNLFWTPCAIYCINQVLEDFLKIRCVEECMEKGQKITKLIYNQIWLLNLMKSEFTHGNELLKPAGTQCASSFATLQNLLDHRVSLRRMFLSNKWMSSRFSSSSQGKEVQKIVLNVTFWKKMQYVRNSVYPILQVFQKMSSGESLSMPYVYNDLYRAKLAIKTIHGDDARKYEPFWKVIDRHCNSLFCHPLYLAAYFLNPSYRYRQDFVSHSDVVRGLNECIVRLELDNMRRISASMQIPHYNSAQDDFGTELAISTRTGLEPAAWWQQHGISCLELQRIAVRILSQTCSSFACEHDGSMYDQIYSKRKNRLSQKKLNDIMYVHYNLRLRECQVRKRSRESKSTSAENVLQEHLLGDWIVDTTAQSSDSDKNISFGVELDDEYENDSIDYDDGSERHLKGSHELVTMADGAVGSSDADHANIDGASDDESDLNYFDDDMSE 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01988 901 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Mepo6g01988 901 PANTHER OSJNBA0013A04.12 PROTEIN 20 93 - -
Mepo6g01988 901 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Mepo6g01988 901 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Mepo6g01988 901 Coils Coil 218 238 - -
Mepo6g01988 901 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Mepo6g01988 901 MobiDBLite consensus disorder prediction 871 901 - -
Mepo6g01988 901 Pfam hAT family C-terminal dimerisation region 716 787 IPR008906 GO:0046983
Mepo6g01988 901 MobiDBLite consensus disorder prediction 203 222 - -
Mepo6g01988 901 Pfam Protein of unknown function (DUF 659) 346 497 IPR007021 -
Mepo6g01988 901 MobiDBLite consensus disorder prediction 198 222 - -
Mepo6g01988 901 SUPERFAMILY Ribonuclease H-like 370 789 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01988 Mepo-Chr6 23353894 23360198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01988 - - tpra:123882853 1661.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01988 6 23353894 23360198 Mepo6g01988 6 23353894 23360198 ECH