Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01985 ATGTTTCAACGTGTTTGGGAGTATTTTATAGGTATATTACCCCACTGTATTGTAGTAGAACACGTATCTCAGTCAAATAGCTGCCAAAAAACTCAATATCATCATCATAAGATGAGTTTGAAGTATATGCTGGTTGTTACATGTCTTTGGATTTGGACTCTATCTTTGGCTTATACAATTTCTAATGATGGCTTGATGAGAATTAGTCTAAAAAAGAGGAATTTAGACATTCAAAGTTTTAACACTTCAAGAATTAAAAGGGAAATTCATGAAAGAGATTTAGTGAGTGTTGATTCAAATTATGGCTCAAAAGATGTTGTTTATCTTAAGAATTACTTTGATGTACAATATTATGGGGAAATTGGTATTGGTTCACCACCACAGTACTTCAATGTTGTGTTTGACACTGGTAGCTCTGATCTTTGGGTTCCATCTTCCAGATGCATCTTGTCAATTGCTTGCTATTTTCATTCAACGTATAAGTCGAGGTTATCTAGCACCTATAACGAAATTGGAGTACCGTGTGAAATCCCGTATGACGAAGGATACATTAATGGATTCTTCAGCCAAGACAATGTAAAAGTTGGGGATATAAATGTCAAAGACCAAGAATTTTGTGAGATTACAAGGGAAGGAAATTTTGCACTTTTAGCTCTTCCATTTGATGGTATACTTGGACTTGGATTTCAGGATGTTTCAGTTGGGAAAGTCACACCAGTGTGGTATAATATGATAGAACAAGGGCATATTTTGGACAAAGTTTTCTCCCTATGGTTAAATAAGGATCCAATGGCAGAAGTAGGGGGTGAGATTGTCTTTGGTGGTGTAGACAAGAGGCATTTTAGAGGTGACCACACTTACTTTCCAATTTCTCAAAAGGGTTATTGGCAGATTGAAGTGGGAGATATTCTACTTGCAAATAATACAACAGGTTTATGTGAGGGTGGCTGTGCTGCAATAGTGGACTCAGGGACTTCTTTAATTGCTGGTCCAACTGGTGTTGTGACTCAAATTAACCATGCCATTGGAACAGAAGGATATGTTAGTTATGAGTGTAAAAACATTGTACATAACTATGGAAATTTGATATGGGAATCATTGATTTCAGGGTTAAATCCTGAAATCTTATGTGCTGACATTAGACTTTGTTCAGATAATGGATTTCAAATAATGAATGATGTTATTGAAACAGTGGTGCATAATGAAAGTTGGGATGGATCACCATTAAGAGAGAGTCTCTTTTGTAGTTTTTGCAATATGGTTGTTCTTTGGATGCAAAATCAGATTAAGCAAAGCAATGTAAAGGAAAAAGTATTAATATATGTCGATGAGCTGTGCGAGAGGCTCCCAAATCCAGTTGGACAATCATTTATAAACTGCAGTAGTGTCTCGGATATGCCACACATTACATTCACAATTGGAAACAAGTTGTTTCCTCTCTCTCCAGAACAGTATGTTCTTAGAGTTGAATCAGACGATGAAGATTGTTCTCCTGTGTGCTATAGCGGTTTTGTTGCTCTTGACGTGCCTTCCCCACAGGGTCCCCTCTGGGTTGTTGGAGACATTTTCTTGCAGGCATATCATACAGTGTTTGACTACGCCAATCTCCGTATAGGATTTGCAGAATCTGCATAG 1635 0.3725 MFQRVWEYFIGILPHCIVVEHVSQSNSCQKTQYHHHKMSLKYMLVVTCLWIWTLSLAYTISNDGLMRISLKKRNLDIQSFNTSRIKREIHERDLVSVDSNYGSKDVVYLKNYFDVQYYGEIGIGSPPQYFNVVFDTGSSDLWVPSSRCILSIACYFHSTYKSRLSSTYNEIGVPCEIPYDEGYINGFFSQDNVKVGDINVKDQEFCEITREGNFALLALPFDGILGLGFQDVSVGKVTPVWYNMIEQGHILDKVFSLWLNKDPMAEVGGEIVFGGVDKRHFRGDHTYFPISQKGYWQIEVGDILLANNTTGLCEGGCAAIVDSGTSLIAGPTGVVTQINHAIGTEGYVSYECKNIVHNYGNLIWESLISGLNPEILCADIRLCSDNGFQIMNDVIETVVHNESWDGSPLRESLFCSFCNMVVLWMQNQIKQSNVKEKVLIYVDELCERLPNPVGQSFINCSSVSDMPHITFTIGNKLFPLSPEQYVLRVESDDEDCSPVCYSGFVALDVPSPQGPLWVVGDIFLQAYHTVFDYANLRIGFAESA 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01985 544 Pfam Saposin-like type B, region 2 351 383 IPR008138 -
Mepo6g01985 544 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 132 143 IPR001969 GO:0004190|GO:0006508
Mepo6g01985 544 SUPERFAMILY Acid proteases 46 542 IPR021109 -
Mepo6g01985 544 Gene3D Acid Proteases 276 544 IPR021109 -
Mepo6g01985 544 Gene3D - 347 450 - -
Mepo6g01985 544 FunFam Lysosomal aspartic protease 102 345 - -
Mepo6g01985 544 PRINTS Pepsin (A1) aspartic protease family signature 123 143 IPR001461 GO:0004190|GO:0006508
Mepo6g01985 544 PRINTS Pepsin (A1) aspartic protease family signature 269 282 IPR001461 GO:0004190|GO:0006508
Mepo6g01985 544 PRINTS Pepsin (A1) aspartic protease family signature 517 532 IPR001461 GO:0004190|GO:0006508
Mepo6g01985 544 PRINTS Pepsin (A1) aspartic protease family signature 319 330 IPR001461 GO:0004190|GO:0006508
Mepo6g01985 544 Pfam Saposin-like type B, region 1 414 450 IPR007856 GO:0006629
Mepo6g01985 544 SUPERFAMILY Saposin 348 450 IPR011001 -
Mepo6g01985 544 Gene3D Acid Proteases 66 275 IPR021109 -
Mepo6g01985 544 Pfam Eukaryotic aspartyl protease 116 542 IPR033121 -
Mepo6g01985 544 ProSiteProfiles Peptidase family A1 domain profile. 117 541 IPR033121 -
Mepo6g01985 544 ProSiteProfiles Saposin B type domain profile. 347 387 IPR008139 -
Mepo6g01985 544 ProSiteProfiles Saposin B type domain profile. 411 452 IPR008139 -
Mepo6g01985 544 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 319 330 IPR001969 GO:0004190|GO:0006508
Mepo6g01985 544 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 54 542 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01985 Mepo-Chr6 23300951 23305723 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01985 K08245 - gmx:100500551 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01985 6 23300951 23305723 Mepo6g01985 6 23300951 23305723 ECH