Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01980 ATGGATTCTTGTTTGGATTTTCCATTACTGGTCTTATATTTTCCAAGTGAATGTTATGTTTTTATTTCGATTGGCTTTATTTATGATTTATTTTTATTTTTGTTTTTGATCTTCCTAGTGGTGCAAAACAAGGATGGAACTGTTGCAGTAGCTTCTGCTTTTGCTGGCCACAAGCAAGCTATCAAGGATAGAGACCATAAATTTTTAAGAAAAGCAGTTGAAGAAGCCTATAAAGGTGTAGAATGTGAAGATGGAGGTCCATTTGGTGCTGTTATAGTTTTGAATGATGAAGTTATTGCTAGTTGTCACAACATGGTTCTAAGGAACACAGACCCTTCTGCTCATGCTGAAGTCACAGCAATAAGAGAGGCTTGTAAGAAGCTGAAGCAGATAGAACTTTCTGAATGTGAAATATATGCTTCTTGTGAGCCATGTCCAATGTGCTTTGGTGCTATCCACCTTTCACGTGTTAAGAGGTTGGTTTATGGAGCAAAAGCTGAGGCAGCAATTGCAATTGGTTTTGATGATTTTATAGCTGATGCATTGAGAGGTACTGGATTTTATCAGAAAGCACAATTGGAAATTAAAAGAGCTGATGGCAATGAAGCCATAATTGCTGAAGAAGTGTTTGAGAAAACAAAGGAAAAATTTCGAATGTATTAA 663 0.3635 MDSCLDFPLLVLYFPSECYVFISIGFIYDLFLFLFLIFLVVQNKDGTVAVASAFAGHKQAIKDRDHKFLRKAVEEAYKGVECEDGGPFGAVIVLNDEVIASCHNMVLRNTDPSAHAEVTAIREACKKLKQIELSECEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKRADGNEAIIAEEVFEKTKEKFRMY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01980 220 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 63 177 IPR002125 -
Mepo6g01980 220 SUPERFAMILY Cytidine deaminase-like 61 178 IPR016193 GO:0003824
Mepo6g01980 220 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 58 167 - -
Mepo6g01980 220 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 64 163 IPR002125 -
Mepo6g01980 220 FunFam tRNA-specific adenosine deaminase 63 219 - -
Mepo6g01980 220 Gene3D Cytidine Deaminase, domain 2 56 219 - -
Mepo6g01980 220 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 115 152 IPR016192 GO:0008270|GO:0016787
Mepo6g01980 220 CDD nucleoside_deaminase 69 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01980 Mepo-Chr6 23266235 23268391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01980 - - gmx:100500436 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00596 1 5659412 5663089 Mepo6g01980 6 23266235 23268391 PCT