Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01972 ATGTTAACTTCTTCGCTCTCATTCCTTCATTCTTGCACATTTCCTTCTTCTTCTTCCTCTTCTTTGTTCACAATTCCAACGCCAAATCTCAATTCATCTTCTTCCTCTTTATCTTTTGTGGTTGAAGCCAAAGTCACTACCCGAAGAGAAGACAGAACTGCTCGCCATGTTCGCATCAGAAAGAAGGTTGAAGGAACACCCGAAAGACCAAGATTGTCAGTCTTCCGATCCAACAAGCATCTCTTTGTCCAAGTGATTGACGACACCAAGATGCATACACTTGCTTCAGCTTCGACAATGCAGAAGGCAATTGCTGAAGAGTTGAACTTCACCTCTGGTCCTACAATTGAAGTAGCAAAGAGGGTGGGTGAAATCATTGCAAAATCCTGTCTGGAAAAAGGGATCACAAAGGTAGCCTTTGACAGAGGTGGTTACCCATACCATGGCCGTGTTAAAGCTATTGCTGATGCAGCTCGCGAACATGGCCTCGAGTTCTAA 498 0.4418 MLTSSLSFLHSCTFPSSSSSSLFTIPTPNLNSSSSSLSFVVEAKVTTRREDRTARHVRIRKKVEGTPERPRLSVFRSNKHLFVQVIDDTKMHTLASASTMQKAIAEELNFTSGPTIEVAKRVGEIIAKSCLEKGITKVAFDRGGYPYHGRVKAIADAAREHGLEF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01972 165 NCBIfam 50S ribosomal protein L18 49 165 IPR004389 GO:0003735|GO:0005840|GO:0006412
Mepo6g01972 165 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 47 165 IPR005484 GO:0003735|GO:0005840|GO:0006412
Mepo6g01972 165 CDD Ribosomal_L18_L5e 59 163 - -
Mepo6g01972 165 Hamap 50S ribosomal protein L18 [rplR]. 47 165 IPR004389 GO:0003735|GO:0005840|GO:0006412
Mepo6g01972 165 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 42 165 IPR005484 GO:0003735|GO:0005840|GO:0006412
Mepo6g01972 165 FunFam 50S ribosomal protein L18 46 165 - -
Mepo6g01972 165 SUPERFAMILY Translational machinery components 48 163 - -
Mepo6g01972 165 Gene3D - 46 165 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01972 K02881 - gmx:100306308 229.18