Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01770 ATGGAGTGCGTTGGAGCGAGAAACTTAACGGCAATGGCGTTTTGCATAAGTCCTTCATTGCGGTTAAGGAGAAAGAAGATTTGTTGGAGAAGAAGAGAAGCTTCCTCGAACGCGATTCGTTTGCGTTCGATGAAACTGTACGCGAAAGCAGGTGGTGCAGGAAGTGAGAGTTGTGTTGTTGCTAAAGAGGATTATGCTGATGAGGAGGATTTTGTTAAAGCTGGTGGTTCTGAACTTGTTTTTGTTCAAATGCAGCAGAAAAAGTCTATGGATATGCAATCTAAGCTTGCGGATAAGTTGCCACCTATCTCTGTTGGAGATGGTATACTAGATCTAGTTGTTATTGGTTGTGGTCCTGCTGGTCTTGCTCTAGCTGCTGAATCTGGCAAGTTAGGATTAAAAGTTGGACTTATTGGTCCGGATCTCCCTTTCACAAACAACTACGGTGTGTGGGAGGATGAATTTAAAGGTCTTGGACTTGAAGGTTGTATTGAACATGTTTGGAAGGATACCGTCGTATATATTGATAATAAAAATCCCATTTCAATTGGACGTTCTTATGGCCGTGTCAGTCGGCATTTGCTTCACGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCGTATCTTGGCTCAAAAGTAGAAAGGATTGTTGAGGCTAGCAATGGTCATAATCATGTTGTCTGTGAATATGATACTGTAGTGCCCTGCAGGCTTGCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTATTGCAGTATGAGGTTGGGGGTCCAAAGGTGTGTGTACAAACAGCTTATGGTGTGGAAGTTGAGGTTGAAAACAGTCCTTATGATCCAAATGTGATGGTTTTCATGGATTACAGAGACTATATGAAGAACAATGTTCAAAGTCTAGAAGCTAAATATCCAACATTTCTTTATGCAATGCCCATGTCTCGTTCAAAAGTGTTCTTTGAGGAAACATGTTTGGCATCTAAAGATGCCATGCCTTTTGATTTATTAAAGAAAAAGCTCTTATCAAGATTAAATACGATGGGGATCAAAGTTACAAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCTTACCAAACACAGAGCAGAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGCTACTCTGTTGTGAGATCGTTGTCGGAAGCTCCGCAATATGCTTCAGTAATTGCTACAATTTTGAATGACGGTAATGCAAGGGACATTATTACTTATGGAAGAAGTAAGGAGAATCCATCAATGCGAGCTTGGAATACACTTTGGCCACAAGAAAGGAAACGACAGAGATCATTCTTTCTTTTTGGATTAGCACTAATTGTGCAGCTGGACATTGAGGGCACTAGAACATTCTTTCGTACTTTCTTCTGCTTACCTGAGTGGATGTGGCAGGGATTTCTTGGTTCTTCTCTGTCCTCGAAAGATCTTCTATTGTTTGCACTCTACATGTTCATAATAGCACCAAATAACTTAAGAATGTCTCTAGTCAGACATCTGCTTTCAGATCCTACAGGGTCAACTATGATAAAAACCTACTTGACGATATAG 1596 0.4142 MECVGARNLTAMAFCISPSLRLRRKKICWRRREASSNAIRLRSMKLYAKAGGAGSESCVVAKEDYADEEDFVKAGGSELVFVQMQQKKSMDMQSKLADKLPPISVGDGILDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTVVYIDNKNPISIGRSYGRVSRHLLHEELLRRCVESGVSYLGSKVERIVEASNGHNHVVCEYDTVVPCRLATVASGAASGKLLQYEVGGPKVCVQTAYGVEVEVENSPYDPNVMVFMDYRDYMKNNVQSLEAKYPTFLYAMPMSRSKVFFEETCLASKDAMPFDLLKKKLLSRLNTMGIKVTKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPQYASVIATILNDGNARDIITYGRSKENPSMRAWNTLWPQERKRQRSFFLFGLALIVQLDIEGTRTFFRTFFCLPEWMWQGFLGSSLSSKDLLLFALYMFIIAPNNLRMSLVRHLLSDPTGSTMIKTYLTI 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01770 531 PANTHER - 24 529 - -
Mepo6g01770 531 Gene3D - 110 437 IPR036188 -
Mepo6g01770 531 Pfam Lycopene cyclase protein 111 508 - -
Mepo6g01770 531 FunFam lycopene epsilon cyclase, chloroplastic 107 450 - -
Mepo6g01770 531 NCBIfam lycopene cyclase family protein 111 511 IPR010108 GO:0016117|GO:0016705
Mepo6g01770 531 SUPERFAMILY FAD/NAD(P)-binding domain 110 504 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01770 Mepo-Chr6 19947619 19954921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01770 K06444 - gmx:100788180 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01770 6 19947619 19954921 Mepo6g01770 6 19947619 19954921 ECH