Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01736 ATGATCAGTTTCCCTTTTTCCTTTAGTACAAGTAAAACCGAGCAATGGAAATCATCACTACCAAAAGAATTATTCACCACAAAAAATTCAAACATATCTCAAAAACTCATAAACGACCCAAAAGCCATTGAACTAGCTTCAAGTGATTATGGCAACCTCGTACATGAATTCCCAGCAGCAGTGTTTCAACCATCAACGGTAAACGACATAGTAAGTCTTGTAAAGTTGTCGTATAATAGTTCTGTCCCTTTTCTAATAGCTGCAAGAGGACAAGGTCATTCCACACGAGGACAAGCTATGGCACGTGATGGTGTTGTTGTTGACATGAAAGGGTTGAGAAGATTGAATAATAATGAAAATAATATTAATAATAAAAATGTTAATGATGGTGTTGGAATTAAGGTTTTTGAGGATCCTAAGGTTGGATTTGGATACTATGTTGATGTTGGAGGGGAACAACTATGGATTGATGTGTTGTATGAAACACTTGAGTATGGACTTGCACCTGTTTCTTGGACTGATTATCTTTACTTGACTATTGGAGGGACACTCTCTAATGCTGGTATTAGTGGACAAACCTTTCGTTATGGTCCTCAAATTACTGGTGTTCATCAATTGGATGTTGTTACTGGAAAAGGAGAATTTGTAACATGTTCAAAAGAGAACAATTCAGAATTATTTAATGGAGTTCTTGGAGGATTAGGACAATTTGGAATTATAACAAGGGCAAGAATAGCTCTTGAGCCAGCACCAAAGAGGGTTAAATGGGTAAGACTTTTGTATAGTGATTTTTCTGTTTTTACCAGAGACCAAGAACGGTTAATCTCAATGAAAGGAAACAAAAATAGTGCATTGGATTATTTGGAAGGGATGGTATTAATGAATCAAGGACCCATAAATAATTGGAGATCTTCTTTCTTCCCTTTAACCGACCATCATAGAATACTTTCCCTAGTAACTCAACATACGGTCCTATATTGCTTGGAAATTGCCAAATATTATGATGATCATTCTGAAAACAATGTGAACAAGGAAATTCAAGTTTTGCTCCAAGGACTGAACTATATCCCTGGATTTCATTATGAAAAAAATGTGTCATTTGTTGAGTTCTTGAATAGAGTGAGAAGTGGAGAGTTGAAGCTTCAATCACAAGGACTATGGGATGTTCCTCATCCATGGCTTAATATGTTTATACCGAAATCAAGAATCTTAGATTTTAATTTAGGTGTCTTCAAGAAAATTATTCAAAAACGTAACATTACCACAGGACCTGTCTTGGTTTATCCCATGAATAGAAACAAATGGGACAATGAGATGTCAGCAACAATACCAGATGATGAGGATGATATCTTCTATGCTGTTGGATTTTTGCACTCAAGTGGGTTTGATAATTGGAAAGCATTTGATGCTCAAAACAAAGAAATTTTGCAATTTTGTAATCATGCTGGGATTAACTATAAGCTATATCTTCCCCACTACAGCACACAGGAAGAATGGACAAACCATTTTGGTCCTAAAAAATGGAAAACTTTTTCACAAAGAAAAAATCAGTTTGATCCAAGAATGGTTCTATCACCTGGACAAAGAATCTTCAACAACAATTAA 1605 0.3545 MISFPFSFSTSKTEQWKSSLPKELFTTKNSNISQKLINDPKAIELASSDYGNLVHEFPAAVFQPSTVNDIVSLVKLSYNSSVPFLIAARGQGHSTRGQAMARDGVVVDMKGLRRLNNNENNINNKNVNDGVGIKVFEDPKVGFGYYVDVGGEQLWIDVLYETLEYGLAPVSWTDYLYLTIGGTLSNAGISGQTFRYGPQITGVHQLDVVTGKGEFVTCSKENNSELFNGVLGGLGQFGIITRARIALEPAPKRVKWVRLLYSDFSVFTRDQERLISMKGNKNSALDYLEGMVLMNQGPINNWRSSFFPLTDHHRILSLVTQHTVLYCLEIAKYYDDHSENNVNKEIQVLLQGLNYIPGFHYEKNVSFVEFLNRVRSGELKLQSQGLWDVPHPWLNMFIPKSRILDFNLGVFKKIIQKRNITTGPVLVYPMNRNKWDNEMSATIPDDEDDIFYAVGFLHSSGFDNWKAFDAQNKEILQFCNHAGINYKLYLPHYSTQEEWTNHFGPKKWKTFSQRKNQFDPRMVLSPGQRIFNNN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01736 534 ProSiteProfiles PCMH-type FAD-binding domain profile. 54 250 IPR016166 GO:0071949
Mepo6g01736 534 FunFam Cytokinin dehydrogenase 2 253 489 - -
Mepo6g01736 534 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 251 531 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mepo6g01736 534 SUPERFAMILY FAD-binding/transporter-associated domain-like 34 249 IPR036318 GO:0050660
Mepo6g01736 534 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 58 93 IPR006093 GO:0016491
Mepo6g01736 534 Gene3D - 253 489 IPR016170 -
Mepo6g01736 534 Pfam FAD binding domain 58 219 IPR006094 GO:0050660
Mepo6g01736 534 PANTHER GULONOLACTONE OXIDASE 17 532 - -
Mepo6g01736 534 SUPERFAMILY FAD-linked oxidases, C-terminal domain 251 532 IPR016164 GO:0003824|GO:0050660
Mepo6g01736 534 Gene3D - 109 252 IPR016169 -
Mepo6g01736 534 Gene3D - 39 531 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01736 Mepo-Chr6 19530846 19538021 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01736 K00279 - gmx:100804431 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00447 1 4289093 4292730 Mepo6g01736 6 19530846 19538021 PCT