LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g01702	ATGGCCAAACCAATAGTAGACTTCACAGTACAAAAAATCAGTGATTTACTCATTGATGAAGCTGTGTTCTTATATGGAGTGAAAGACAAAGTGCAAAGTCTTAGAACTGAATTAAGGAGGATGGAATCTTACTTACAAGATGCAGATAGAAAGCAAGATGAAGATGAAACTCTCAAGAATTGGATTTCAGAAATCAGAGAAGCTTCTTATGATTCAGATGATGTCATTGAAGCATATGCACTCAAAGAAGCCTCAAGAAGAAACATGACAGGTACCTTAAACAGAATCAAAAGGTATGTTTCAATTATCAACAGGTTAATAGAAATTCATCAAGTAGGTTCACAAGTTGATGACATCATTTCTAGGATAACTAGTCTTACAAAAAGTTTAAAAACTTTTGGCATAAAAAGTGAAATAGGAGAAGCATCAAGTTCAATACATGGGAGAAACAAAGCTTTGAGAAGATCTTACTCTCATGTTATTGAAGAGGATATAATTGGTGTTGAAAATGATGTTAATATTTTGGAGTCATGTTTGGTTAATAAGAACAATAAGGGGTGCAAAATTGTTGCTATTTGGGGTATGGGAGGTTTAGGAAAAACAACATTGGCTAAGAAAGTATATCATAGTACTAAAGTTAGGCAAAATTTTGAGAGCTTAGCTTGGGCTTATATATCACAACATTGTCAAGCAAGGGATGTTTGGGAAGGGATTTTGTTGAAGCTTTTATCTCCTTCTAAAGAGTTAAGAGAAGAACTCGTGAGTATGAAAGACGAGGAAGTTGCAAAAAAGCTTTATCAAGTTCAAGTGGAGAAGAAGTGTTTGGTAGTTCTTGATGATATTTGGAGTGTAGGTACTTGGAATAATCTGAGTCCTGGTTTTCCAAATGAGAGATCATTGTCTGTTGTTGGTAGTAAAATATTGCTTACTACGAGGAATACCGAGGTTGCAATGCATATGGATTCTACTTGTTATCGCCATGACCTGAGTTGCTTGAATGAAGATGATAGCTGGGAGTTGTTCCAGAAAAAGGCATGCCCAAAACATGATGATCCAGATCCAGACTCTAGAATCAGCACAGAGATGGAGAAATTGGGAAGAGAAATGGTCGGAAGATGTGGAGGTTTACCTCTAGCCATAATTGTCCTTGGAGGACTACTAGCATCAAAGCCAACATTTTATGAATGGGACACAGTGAGACAGAACATCAATTCATACCTAAGAAAAGCAAAAGGCAAAGAACAACTTCTAGGAGTATCTGAAGTACTAGCTTTGAGCTATTACGAATTGCCTTACCAATTAAAACCATGTTTCCTACACTTGGCACATTTTCTTGAAAACTTAGAGATACAAACCAAGAAACTTATAAGAACATGGGTGGCAGAAGGTATCATATCATCGGTTCAAAATGCCGGAGACGGCGAGGAAGCTCTCGAGGACGTGGCACGACGTTACTTGACCGAACTTGTTGAAAGGTGTATGATTCAGGTCGTTGAAAAGAGTACAACAGGAAGGATTAGAACGGTTCAAATGCATAATCTCATGAGGGACCTCTGTGTGTCTAAGGCATATGAAGAAAACTTTCTTGATATTATTGATTCGAGGAATGCAGATCAAACTAGTACCTCGAAAGCGAGACCTACTGGTAAAGTTCGACGGATCGCGTTATATCTTGATCAAGATGTTGATAGATTCTTCCCTAGACATTTAAAAAGCCATCACCATCTTAGGTCTATACTTTGCTACCATGAAAAAACAGCTAGGTTAACTGGATGGAGTATGATGAAATCGGTTTTCAAAAAGTGCAAGTTACTTAGAGTTTTGAATTTGGAAGGAATTCAATGTCAAATGGGGAAATTACCTAAAGAAATTGGATTTTTGATCCATTTAAGGTTTCTAAGTCTAAGAAACACCAAAATTGATGAATTGCCAGATTCAATAGGAAATTTAAAGTGCTTGCAAACCCTAGACCTTCTCACAGGAAATTCAACAGTTCAAATACCAAATGTCATAGGAAACATGGAAAAATTAAGACATTTATATCTACCTGAATCATGTGGCAATGACATTGAAAAATGGCAACTATCCAATCTGAAAAACTTGCAAACTTTGGTTAACTTCCCTGCTGAGAAATGTGATGTAAAAGATCTCATGAAACTAACCAATTTAAGAAAATTGGTAATAGATGATCCTAATTATGGCGATATCTTCAAAAGTACTAATGTAACCTTCAACCACCTCGAGTCATTGTTTTACGTTAGTTCTGAGGAAATATCAGTTCTTGATGTTTCTGCAGGGTGTCCTAATCTTTACAAGCTACACATAGAAGGGCCAATAAGTAATCTTCCACAACCAAACCAAATTTCACCAAAACTTGCTAAGCTCAAATTACAAGGTTCTGGACTTGTTGCCGATCCAATGACGACATTGGAGAAGCTACCAAATTTAAGGTTGCTTGAGTTACAGCTTGATTCATTTTTAGGAAAGCAAATGGTTTGTTCAAGCAAAGGTTTTCCTCAGTTAAGGTCACTTGTTTTGAGTGATTTGTCTAATCTTGAACAGTGGAAGGTTGAGAAAGGTGCTATGTGTTGTCTTGGGAAGCTTGAGATTTCTAATTGTACTAAGCTTGAGGTTGTTCCAGAAGAGATTAGGTTTGTAAGGAGTCTTAAGGATTTGGAGATTAGATCAATGTTTGCTGCATTTAGAATTAAGCTTGAGAAAGGTGGTGATGAACATTACAAAGTTCAACATGTTCCATCTTTGATATTTCGTTACTGTGACTATTAG	2787	0.3663	MAKPIVDFTVQKISDLLIDEAVFLYGVKDKVQSLRTELRRMESYLQDADRKQDEDETLKNWISEIREASYDSDDVIEAYALKEASRRNMTGTLNRIKRYVSIINRLIEIHQVGSQVDDIISRITSLTKSLKTFGIKSEIGEASSSIHGRNKALRRSYSHVIEEDIIGVENDVNILESCLVNKNNKGCKIVAIWGMGGLGKTTLAKKVYHSTKVRQNFESLAWAYISQHCQARDVWEGILLKLLSPSKELREELVSMKDEEVAKKLYQVQVEKKCLVVLDDIWSVGTWNNLSPGFPNERSLSVVGSKILLTTRNTEVAMHMDSTCYRHDLSCLNEDDSWELFQKKACPKHDDPDPDSRISTEMEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWDTVRQNINSYLRKAKGKEQLLGVSEVLALSYYELPYQLKPCFLHLAHFLENLEIQTKKLIRTWVAEGIISSVQNAGDGEEALEDVARRYLTELVERCMIQVVEKSTTGRIRTVQMHNLMRDLCVSKAYEENFLDIIDSRNADQTSTSKARPTGKVRRIALYLDQDVDRFFPRHLKSHHHLRSILCYHEKTARLTGWSMMKSVFKKCKLLRVLNLEGIQCQMGKLPKEIGFLIHLRFLSLRNTKIDELPDSIGNLKCLQTLDLLTGNSTVQIPNVIGNMEKLRHLYLPESCGNDIEKWQLSNLKNLQTLVNFPAEKCDVKDLMKLTNLRKLVIDDPNYGDIFKSTNVTFNHLESLFYVSSEEISVLDVSAGCPNLYKLHIEGPISNLPQPNQISPKLAKLKLQGSGLVADPMTTLEKLPNLRLLELQLDSFLGKQMVCSSKGFPQLRSLVLSDLSNLEQWKVEKGAMCCLGKLEISNCTKLEVVPEEIRFVRSLKDLEIRSMFAAFRIKLEKGGDEHYKVQHVPSLIFRYCDY	928

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g01702	928	Gene3D	-	5	113	-	-
	Mepo6g01702	928	FunFam	Probable disease resistance protein At5g66910	331	426	-	-
	Mepo6g01702	928	CDD	RX-CC_like	2	128	IPR038005	-
	Mepo6g01702	928	FunFam	Probable disease resistance protein At1g61300	148	323	-	-
	Mepo6g01702	928	Pfam	NB-ARC domain	169	427	IPR002182	GO:0043531
	Mepo6g01702	928	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	150	441	IPR027417	-
	Mepo6g01702	928	Pfam	Rx N-terminal domain	6	88	IPR041118	-
	Mepo6g01702	928	FunFam	Probable disease resistance protein At1g63360	427	521	-	-
	Mepo6g01702	928	Gene3D	-	331	425	IPR042197	-
	Mepo6g01702	928	PRINTS	Disease resistance protein signature	811	827	-	-
	Mepo6g01702	928	PRINTS	Disease resistance protein signature	373	387	-	-
	Mepo6g01702	928	PRINTS	Disease resistance protein signature	189	204	-	-
	Mepo6g01702	928	PRINTS	Disease resistance protein signature	268	282	-	-
	Mepo6g01702	928	Gene3D	-	426	523	IPR036388	-
	Mepo6g01702	928	PANTHER	DISEASE RESISTANCE PROTEIN RP	31	874	IPR044974	GO:0006952
	Mepo6g01702	928	SUPERFAMILY	L domain-like	510	896	-	-
	Mepo6g01702	928	Gene3D	-	151	326	IPR027417	-
	Mepo6g01702	928	Gene3D	Ribonuclease Inhibitor	536	910	IPR032675	-
	Mepo6g01702	928	Coils	Coil	31	54	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g01702	Mepo-Chr6	19129778	19133767	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g01702	570	688	Receptor kinase-like Gene Family	AT5G27060	34.559	2.47e-09	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g01702	-		-	gmx:100305356	1329.31