Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01700 ATGATCAAAGGTAAAGATGTATACAATATTCTTGAGAGTATTATGCCCCTATATGTGGCCATGATATTAGGTTATGGGTCAATTAAATGGTGGAAAATCTTTACACCCGATCAATGTGCTGGTATAAACCGTTTTGTGGCAATGTTTGCAGTTCCTACACTTTCTTTTATTTACATCTACCCAATTAACCCTTATCATATGAATTGGAGGTTAATACTTGCTGACACACTTCAAAAAGTTGTGACATTGGCTTGTCTAGCTCTATGGAACATTTTCACAAAACGTGGTGGTTTAGATTGGAGTATAACCCTTTTTTCACTTACCAATTTGCCAAACACACTTGTTGTTGGGATCCCTCTTTTGAATGCAATGTATGGAGAATTTACCAAACCACTTTTGACCCAAATTTTGGTTTTGCAAGGTGTTGTTTGGTATACTATTTTGTTGTTGATGTATGAATATAGAGCTGCTAAGCTTTTTATTTCTCAACAATTTGTTGACACTAATGAAGGGTCCCACAAGATTGAAATTGAATCACTTGATGAAGTAGAATTGGGAGAAATTGGTAATAACATTAGTGTCAAGTCTCATTCAACACCTAGAGTGCCAAATCTTAATAGGGTTGATGTACATTCAAGTTACACAAATAGTCCCCAAAGTAATGGTTCTGAAGACAATGTATTAAACATGCATTGGACAAGATTTAAGAAGAGTAGGAGTTTGACCAATGTGGGTGCATTTATGAAGAGCAAGAGCTGCACTACTATGGGTTCAAAGGTTTCTCCTTACCCAATTCTAAAATCAACTTTTTCAGAAAAAATCATTGATGACCAAAGAAAGTTCAATTTCAGTGAGGGCTTATACATGCCACAAGAAATTGAAGCATCAAAAGGTGTTCATGAATTGATTGGCAGAAGTACTTCTAGTGGTAAAGTAAGTGGAGACAATGATCATGAGAGCGAGGAGAAGCAGAAGGAGCTGGTGGAGATTAAAGAAGAAAATGTTACCAATGAACAACAAATGCAACCTGGTCATGGCACGATGACAAAGCTCATTCTCTTTAGGGTTTGGAAGAAACTCTCAATAAATCCTAATCTCTATGCTTCAGTTCTTGGCATTGTATGGGCTCTCATATCAGCTAGGTGGAATATCAAAATGCCATCAATCGTGCACGACTCTATTACAATAATATCTCATACTGGACTGGGAATGTCCATGTTTAGTCTAGGAATATTCATGGCATTACAACCTAAGATCATTGCTTGTGGAAAAACTCAAGCAACAATTTCTATGGTACTTAAGTTCTTGGTTGGTCCTGCATCATTTGGTGCAACCTCTGCAGCCGTTGGTATTCGTGGAGTTGTTTTTAAAGTAGGAATTATTCAGGCTGCTCTTCCACAAGGCATTGTTCCATTTGTATTCGCCAAAGAGTACAATCTCCATGCCGAAATATTTAACACAGCGGTTTCTCTTGGATTGGCAATTGCGTTTCCTGTAGCGATACTATACTATGTTCTTCTTGAGCTTATCAAATCTTTTTAA 1542 0.3716 MIKGKDVYNILESIMPLYVAMILGYGSIKWWKIFTPDQCAGINRFVAMFAVPTLSFIYIYPINPYHMNWRLILADTLQKVVTLACLALWNIFTKRGGLDWSITLFSLTNLPNTLVVGIPLLNAMYGEFTKPLLTQILVLQGVVWYTILLLMYEYRAAKLFISQQFVDTNEGSHKIEIESLDEVELGEIGNNISVKSHSTPRVPNLNRVDVHSSYTNSPQSNGSEDNVLNMHWTRFKKSRSLTNVGAFMKSKSCTTMGSKVSPYPILKSTFSEKIIDDQRKFNFSEGLYMPQEIEASKGVHELIGRSTSSGKVSGDNDHESEEKQKELVEIKEENVTNEQQMQPGHGTMTKLILFRVWKKLSINPNLYASVLGIVWALISARWNIKMPSIVHDSITIISHTGLGMSMFSLGIFMALQPKIIACGKTQATISMVLKFLVGPASFGATSAAVGIRGVVFKVGIIQAALPQGIVPFVFAKEYNLHAEIFNTAVSLGLAIAFPVAILYYVLLELIKSF 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01700 513 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 509 - -
Mepo6g01700 513 Coils Coil 320 340 - -
Mepo6g01700 513 NCBIfam auxin efflux carrier 1 508 IPR014024 -
Mepo6g01700 513 Pfam Membrane transport protein 10 504 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01700 Mepo-Chr6 19109782 19112150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01700 1 509 Organic Solute Cotransporters AT1G23080 40.453 6.44e-139 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01700 K13947 - sly:100527966 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01700 6 19109782 19112150 Mepo6g01700 6 19109782 19112150 ECH
Mepo1g00421 1 4048020 4050315 Mepo6g01700 6 19109782 19112150 PCT