Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01686 ATGCGCTCAGGAGCTTATACATTGCAAGAGACACTAACAGCCGAGGCTGCTTCAATCTTGAAGCACTCTCTAGGCTTAGCACGTAGAAGAGGCCATGCACAAATCACACCTCTTCATGTTGCTGCTACACTCTTGAGTTTACCATCTTCTTCTTTAAGAAATGCATGTCTCAAATCTCAACAACAAAATAACCATCCTCTTCAATGTAGAGCTCTTGAACTTTGCTTCAATGTTGCTCTTAATAGACTTCCAACAACTACTACTTCACCTTTGCTTCAACCACAGCATGTTCCTTCACTTTCTAATGCACTCATTGCTGCTCTTAAAAGAGCTCAAGCTCATCAAAGAAGGGGGTGTATTGAGCAAAACCAACAACAGCAGCAGCAACCACTTTTGAGTGTTAAAGTTGAACTTGATCAGCTTATTCTTTCCATTCTTGATGACCCTTCTGTTAGTAGAGTTATGAGAGAAGCTGGTTTTTCTAGTCCTTCTGTTAAAAACAATTTGGAAAACTCTTCAACTTTAATTAACTCTTCTAGTGTTTTTCATTCTTCACCTTCTCCTCTTAGTCATAATCATTTTTTGAGTTCTTATGGTTATGGTTCTGTTCTCTTTTCTCCACAGAAGAAAGAACAAGTAGTATATCATCCTTTCTTAAAATCTTCTGAGTCTAATAAGGAAGAAATTAATCTTGTTTTTGATGTTCTTTTGAGGAAGAAGAAGAAAAACACTGTGATAGTTGGTGATACAGTTTCTTTAACCGAAGGACTAGTTGGTGAGATAATGAAAAGATTTGAAAGAGGTGAAGTACCTGATGAGATGAAAACAACTCATTTTGTGAAGTTTCATGGACTTAGTTCAGTTTCTTTGAAGTATATGAAAAAGGAAGAAGTTGAAATGAATGTTATAAGAGTGTTGAAAAGGAAGGTTAGTGATTATGTTGCATTAGGTGTTGGAGCTATTTTCTATGTTGGAGATTTGAAGTGGATAGTGGATGATAATGATGGAAGTTTGAATGAAAAAGATGGTATTTATGGTTATAATGTAGTTGATTATGTTGTGGAAGAAATAGGAAAGTTGTTTGGTGAAGAAGGGAACAAGAATGGTAAGATTTGGCTTGTTGCAACAGCTAGTTATCAAAGTTACATGAGGTGTCAAATGAGGGTACCAACTTTTGAGAATCAATGGTGTCTTCAACCTGTTCCTGTTCCATCTGGTGGACTTGGTTTGAGTCTTCATTCATCAAGTGTGCATGATTCAAAAATGAGCATCTCTCAAAACCCTTCTCCTATATTGGAATCAAAGCTCTTTAGCAACAAGGAGCAACATGATAAGCTTAATTGTTGTGAAGAGTGCCTCTCCAATTATGAAAAAGAAGCTCAATTGTTCAAACCAGACCAGAAGAATCTGTTGCCTTCTTGGCTTCAGTCTCATAGCACAGAAGCACGTCAGAAGGATGAATTAACCCAGTTGAACAAAAAGTGGAACAGATTGTGCCAATGTCTCCACCAGAACAAACAACCTCAAAACCATTGGAGCAATAATCACAGTTCCAATGCAAAGATCTATCCTTATAATTCATCATACCCTTATTGGCCAAACCAAGGTAGTAGTATCTTGCCAGATACATCAAGTTCAATATCTTTTGCTGATTCTGCAACCAAACCAGCTTATAGCTCAAACCTTATACCTCGATTCCGGCGTGGACAACAATCATGCACCATTGAGTTCAACTTCAATGATGAAAAAGCTCAGAAAAACCAAGTAACAACAACCTTGGAATTGGATTCTCTTAAGGGTATGGAAGGTACTAAAGAAGTTAAGACAACTCTTGCACTTGGGAATTCAACATTCAGTGGTTCAGATCAGAAAAAGATGGAAAGTTTAACACTGCAAAGAGATCATGTTTGTAAAGTCTTGCAGGAGAATGTTCCATGGCAATGTGAAACAGTTAGTTCAATAGCAGAAGCTTTGGTTGATTCAAAATCATCAAAGGAATGTGCTACTTGGTTGTTTTTGCAAGGAAATGATTCTGTTGGGAAAAAAAGGTTGGCACTTGCAATAGCAGAATCAGTGTATGGATCAGTTGAAATGTTTTCTCACATGGATATGTTGAAGAGAGAGAATTCAGAGACACCCTTTTCTGAAAAGGTTGTTGGGCCATTGAAAAACAATGAAAAGTTTGTTGTTTTGGTTGAAAATGCTGATTTTGGTGATACCCTTTTAAGGAAAATGCTTGCTGATGAATTTGAGATTGCAAAGTTTGGAACTTTAGGCCAAAAAATATTCATATTATCCAATGGTGGCAGTATGGTCATTGAAGATCAGAAGAAGGATTCAGTGATGAAGTTGGTTTTGAAGATTAGTGAAACTGAGAAAAAACCAACTTTGGAGTTATCACCATCTTCATCATCATCAAAATCACCTTGTTTAGGTAATAAAAGAAGTGCTGAACTTGACTTGTTTAGCAAGATAAAAATTCCAAGGATTGAAGAAAATGAAGGGAACAAAAAGAGAGAATTTTCATTTTCAAGACAATCAAGCTTCAACAACACTCTTGACTTGAACATGAAAGCTGATGAAGAAGATTATGATGATAATGATGAGGGTGAAAATAGTCCAATTTCAAGTGATTTGACAAGAGAAACATTAGGAGAACATTTGATCTCAAATGAGTCACTAGACTCAATTGAGAATGTGTTTGAGTTCAATCAAAGTCCAGCTAAGAACAAGGAAATGACGCAGATGTTTATGTCAAGGGTAAAAGAGTCATTTGAGGAGGTTTTTGGGAATGTAAAATTTAGTGTACAAGATAAGGTGATAGAGGAAATTGGTGTAGGGTGTGGTTCTTTTACTAACAACATGTTTGAGAAATGGCTAAAAGGCATTTTTCAAACAAGTTTAGAGAGGGTTAATGGTGGGGGTAAAAATGGTATAGTTTATACACTTTGTTGGGGTGGTAAAGAGGATAGAAAATGGGATAGTGGGTTTATGGGTTCATGTCTGCCTAAAAATATCCAAATTGTTAACTACTTAATGGATTGA 3045 0.3642 MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQQQNNHPLQCRALELCFNVALNRLPTTTTSPLLQPQHVPSLSNALIAALKRAQAHQRRGCIEQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVKNNLENSSTLINSSSVFHSSPSPLSHNHFLSSYGYGSVLFSPQKKEQVVYHPFLKSSESNKEEINLVFDVLLRKKKKNTVIVGDTVSLTEGLVGEIMKRFERGEVPDEMKTTHFVKFHGLSSVSLKYMKKEEVEMNVIRVLKRKVSDYVALGVGAIFYVGDLKWIVDDNDGSLNEKDGIYGYNVVDYVVEEIGKLFGEEGNKNGKIWLVATASYQSYMRCQMRVPTFENQWCLQPVPVPSGGLGLSLHSSSVHDSKMSISQNPSPILESKLFSNKEQHDKLNCCEECLSNYEKEAQLFKPDQKNLLPSWLQSHSTEARQKDELTQLNKKWNRLCQCLHQNKQPQNHWSNNHSSNAKIYPYNSSYPYWPNQGSSILPDTSSSISFADSATKPAYSSNLIPRFRRGQQSCTIEFNFNDEKAQKNQVTTTLELDSLKGMEGTKEVKTTLALGNSTFSGSDQKKMESLTLQRDHVCKVLQENVPWQCETVSSIAEALVDSKSSKECATWLFLQGNDSVGKKRLALAIAESVYGSVEMFSHMDMLKRENSETPFSEKVVGPLKNNEKFVVLVENADFGDTLLRKMLADEFEIAKFGTLGQKIFILSNGGSMVIEDQKKDSVMKLVLKISETEKKPTLELSPSSSSSKSPCLGNKRSAELDLFSKIKIPRIEENEGNKKREFSFSRQSSFNNTLDLNMKADEEDYDDNDEGENSPISSDLTRETLGEHLISNESLDSIENVFEFNQSPAKNKEMTQMFMSRVKESFEEVFGNVKFSVQDKVIEEIGVGCGSFTNNMFEKWLKGIFQTSLERVNGGGKNGIVYTLCWGGKEDRKWDSGFMGSCLPKNIQIVNYLMD 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01686 1014 Gene3D - 611 758 IPR027417 -
Mepo6g01686 1014 ProSiteProfiles Clp repeat (R) domain profile. 8 175 IPR004176 -
Mepo6g01686 1014 FunFam protein SUPPRESSOR OF MAX2 1 9 175 - -
Mepo6g01686 1014 Gene3D - 9 173 IPR036628 -
Mepo6g01686 1014 SUPERFAMILY Double Clp-N motif 10 167 IPR036628 -
Mepo6g01686 1014 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 980 - -
Mepo6g01686 1014 Pfam Clp amino terminal domain, pathogenicity island component 136 171 IPR004176 -
Mepo6g01686 1014 Pfam Clp amino terminal domain, pathogenicity island component 26 53 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01686 Mepo-Chr6 18937628 18942236 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01686 - - cam:101489668 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01686 6 18937628 18942236 Mepo6g01686 6 18937628 18942236 ECH
Mepo1g00408 1 3937246 3940776 Mepo6g01686 6 18937628 18942236 PCT