Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01642 ATGGAACAACCTCCTTCAGATCCTCCGGCCACCGCTCCGGCCTCCGGCGAAACCATAAGCAAAAGTGCACTGAAGCGTGAGATCAAGAAAAGGGAGAACGAAGAAAAAAAGAGGATAAAGGAGGAGGAAAGAGCCAGAAGGGCTGCTGAAATGAGAAATGCAAACGAGAACAGACCTGCAGCTGCTGATGAGGAAGATATGGATCCAACACAATACTTGGAGAACAGGCTTAAGTATCTTGCAACTGAAAAGGAAGAAGGGAGAAACCCATATCCACACAAATTCTCTGCCACCATGACTATTAGACAATATATCAAGGAGTATGAAGGTTTAAGTGATGGGCAACATCTTGACGATGTTTCTGTGTCTTTGACTGGCAAAATCATGCACAAACGTTCCTCTGGTGCAAAGCTCGTCTTTTATGACCTTCATGATGATGGTTTCAAGGTTCAGGTTATGGCCGATGCGAGTAAATCGGACTTAAATGAGGCTGGGTTTGACAAAGTCCATTCTAATGTGAAGCGTGGTGATATTGTTGGCATCACAGGGTTTCCAGGCAAAAGCAGGAAGGGAGAGCTTAGTATTTTCCCCAAAACTTTTGTGGTGCTGTCACATTGTCTGCATATGATGCCTAGGCAAAAATCTGCTGCTGCTGCTGCTGATAATGCATGGGTACCAGGAAATACCAGGAATCCCGAAGCATACACTCTGAAAGACCAGGAAACTAGATATCGGTTACGCCATTTGGATTTGATGCTTAATACAGAGGTTCGAGAAATATTCCGGACTAGGTCTAAAATCATTTCTTATGTTAGGAGTTTTCTGGACAAGCTTGATTTCTTGGAGGTTGAAACACCTATGATGAACATGATTGCTGGTGGTGCTGCTGCTCGGCCATTTGTAACTCATCATAATGACCTTAACATGAGATTATTCATGAGAATTGCTCCAGAACTCTATCTCAAGAAGTTGGTTGTCGGTGGTCTGAACCGTGTTTATGAAATTGGTAAACAATTTAGGAATGAGGGCATCGATTTGACTCATAATCCTGAATTTACTACCTGTGAGTTCTATATGGCTTACAAGGACTACTATGACTTAATGGAGATAACAGAGAACATGTTGAGCGGTATGGTGTATGAACTTACAAAAGGCAGCTATAAAATCAAGTATCATGCAAATGGTCTTGACAAGGATCCTATTGAAATCGACTTTACTCCACCATTCAGAAGGATTGACATGATTGAAGGACTAGAGGAGATCGCAGGCCTCAATATTCCCAAAGATTTGACGAGTGCTGAAGCTAATCAATATCTAAAGGATGCCTGCTTGAAGTACGAAATCAAATGTCCCCCTCCTGAAACAACTGCACGTTTGTTGGATAAGCTTGTGGGGCACTTTTTGGAGGAAACATGTGTCAATCCTACATTCATCATAAACCACCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCAAAACCAGGCCTGACTGAACGTTTTGAATTGTTTATCAACAAACATGAGCTTGCTAACGCGTATACTGAATTGAATGACCCTGTGGTACAGCGGCAAAGATTTGCTGATCAACTCAAGGATCGGCAATCAGGTGACGACGAAGCAATGGCCTTGGACGAAACATTTTGCACAGCTTTGGAGTATGGTTTGCCACCAACTGCTGGTTGGGGTTTGGGTATTGATCGGTTGACTATGTTATTGACTGATTCACAAAATATCAAGGAGGTTCTTCTCTTCCCTGCCATGAAACCTCAAGATGTCGTGTCCCAATTAAATAATTTACAGGTATAA 1812 0.426 MEQPPSDPPATAPASGETISKSALKREIKKRENEEKKRIKEEERARRAAEMRNANENRPAAADEEDMDPTQYLENRLKYLATEKEEGRNPYPHKFSATMTIRQYIKEYEGLSDGQHLDDVSVSLTGKIMHKRSSGAKLVFYDLHDDGFKVQVMADASKSDLNEAGFDKVHSNVKRGDIVGITGFPGKSRKGELSIFPKTFVVLSHCLHMMPRQKSAAAAADNAWVPGNTRNPEAYTLKDQETRYRLRHLDLMLNTEVREIFRTRSKIISYVRSFLDKLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKKLVVGGLNRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYKDYYDLMEITENMLSGMVYELTKGSYKIKYHANGLDKDPIEIDFTPPFRRIDMIEGLEEIAGLNIPKDLTSAEANQYLKDACLKYEIKCPPPETTARLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELANAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCTALEYGLPPTAGWGLGIDRLTMLLTDSQNIKEVLLFPAMKPQDVVSQLNNLQV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01642 603 Gene3D - 63 211 IPR012340 -
Mepo6g01642 603 MobiDBLite consensus disorder prediction 22 70 - -
Mepo6g01642 603 PIRSF LysRS2 10 603 IPR034762 GO:0004824|GO:0005524|GO:0006430
Mepo6g01642 603 SUPERFAMILY Class II aaRS and biotin synthetases 239 590 IPR045864 -
Mepo6g01642 603 PRINTS Lysyl-tRNA synthetase signature 321 334 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mepo6g01642 603 PRINTS Lysyl-tRNA synthetase signature 276 286 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mepo6g01642 603 PRINTS Lysyl-tRNA synthetase signature 474 490 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mepo6g01642 603 PRINTS Lysyl-tRNA synthetase signature 292 308 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mepo6g01642 603 PRINTS Lysyl-tRNA synthetase signature 339 356 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mepo6g01642 603 Gene3D Bira Bifunctional Protein; Domain 2 235 602 IPR045864 -
Mepo6g01642 603 FunFam Lysine--tRNA ligase 69 212 - -
Mepo6g01642 603 NCBIfam lysine--tRNA ligase 231 592 IPR002313 GO:0004824|GO:0005524|GO:0006430
Mepo6g01642 603 FunFam Lysine--tRNA ligase 235 596 - -
Mepo6g01642 603 Pfam OB-fold nucleic acid binding domain 122 199 IPR004365 GO:0003676
Mepo6g01642 603 CDD LysRS_core 254 591 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Mepo6g01642 603 Hamap Lysine--tRNA ligase [lysS]. 75 592 IPR002313 GO:0004824|GO:0005524|GO:0006430
Mepo6g01642 603 MobiDBLite consensus disorder prediction 1 70 - -
Mepo6g01642 603 Pfam tRNA synthetases class II (D, K and N) 239 589 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mepo6g01642 603 Coils Coil 24 52 - -
Mepo6g01642 603 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 261 591 IPR006195 -
Mepo6g01642 603 SUPERFAMILY Nucleic acid-binding proteins 67 211 IPR012340 -
Mepo6g01642 603 CDD LysRS_N 121 251 IPR044136 GO:0000166
Mepo6g01642 603 PANTHER LYSYL-TRNA SYNTHETASE 17 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01642 Mepo-Chr6 18126209 18134107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01642 K04567 - gmx:100785660 985.711