Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01560 ATGGCCACAAACACCATGGCTGGCTTGATCACTGGCTCTAATTCTCATTTCTCAAATGACTCTGATGAGCATAAGCCTCCTCCTACCGGTAAATCTTCATCAAAAATTTGTCGAGTTTGTGGTGATGAGATTGGATATAAGGAAAATGGAGAGCTTTTTGTGGCTTGTCATGTGTGTGCATTTCCTGTTTGTAAACCTTGTTATGAGTATGAGAGAAGTGAAGGGAATCAATGTTGTCCTCAATGCAACTCTCGCTATAAGCGCCATAAAGGTTGTCCAAGAGTGGTTGGAGATGAAGATGAGAACCTTGATGGAGATGATTTTGAAGACGAGTTTCCGGTTAAGAATCATCATGATGATCTAGACCAGAACCGCGATGTTAATCATGTGGAAAATGTGGACTACAATCAACAGAAATTGCATACTTTTTCTTCAGCAGGAAGTGTTACTGGAAAGGATTTGGAAGGGGAGAAAGAATTCTACAGCAATGAAGAATGGCAAGAAAGAGTAGAAAAATGGAAAGTAAGGCAAGAAAAGAGAGGTCTGCTAAACAAAGAGGATGGTAAAGAAGACCAAGGTGAAGAAGATGAGTACCTTATGGCTGAAGCAAGACAACCATTATGGCGCAAAGTTCCAATATCATCAAGCTTAATAAATCCATACCGAATAGTAATTGTGATGAGACTTGTTATCCTAGCTTTCTTCTTCCGTTTCCGTATCTTAACACCAGCATATGATGCATATCCTTTATGGCTCATATCAGTAATATGTGAAATATGGTTTGCACTATCATGGATACTTGATCAGTTTCCAAAATGGTTACCGATCACACGTGAAACATACTTAGACCGTTTATCTATAAGATTCGAACGTGAAGGCGAACCAAACCAGCTTTCGCCTGTTGATGTTTTTGTTAGTTCTGTTGATCCTTTGAAAGAGCCACCTATTATAACAGCAAACACTGTTTTATCCATACTTTCTGTTGACTACCCTGTTGAGAAAGTTACATGCTATGTATCAGATGATGGTGCTTCTATGCTTTTGTTTGATTGTTTGGCTGAAACTTCTGAGTTTGCTAGAAGGTGGGTTCCTTTTTGTAAAAAGTATAGTATTGAACCAAGGGCACCTGAGTATTACTTTAATGAGAAGATTGATTACTTGAAAGATAAGGTTGAGCCTACTTTTGTCAAGGAAAGAAGGTCTATGAAGAGAGAATATGAAGAATTTAAAGTGAAAATTAATGCTTTGGTGGCAAAGGCTCTGAAGAAACCTGAGGAGGGTTGGGTTATGCAAGATGGAACTCCATGGCCTGGTAACAACACTCGTGATCATCCAGGGATGATTCAGGTATACTTAGGAAGTGCTGGTGCACTAGACGTGGAAGGCAAGGAACTGCCCAAACTCGTGTATATTTCACGTGAAAAACGTCCTGGTTATCCACATCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCATTCATGTTGAATCTCGATTGTGATCACTACATCAACAACAGCAAGGCTATTAGAGAAGCCATGTGCTTCCTAATGGATCCTCAACTAGGGAAGAAACTCTGCTATGTCCAATTTCCTCAAAGATTTGATGGTATTGATCGCCACGATCGATATGCTAATCGCAACACTGTCTTCTTTGATATCAATATGAAAGGGCTTGATGGTATTCAAGGTCCAGTGTATGTCGGTACCGGAACTGTGTTCAACAGACAAGCATTGTATGGCTATGATCCACCAGTTTCTGAGAAAAGGCCGAAGATGACATGTGATTGTTGGCCTAAATGGTGTTGCTTTTGTTGTGGTTCAAGGAAAACCAAATCAAAAAAGAAGTCAGGAACAAATGGAAGAAGTCTCTTTAGTAAATTGTACAAGAAGAAGAAAATGGGAGGAAAAGATTATGTTAGAAAAGGTTCTGGTTCCATGTTTGATCTTGAAGAGATTGAAGAAGGACTTGAAGGGTATGAGGAACTAGAGAAATCATCACTCATGTCACAGAAAAATTTCGAGAAGCGATTCGGTCAGTCTCCAGTTTTCATTGCTTCAACTTTAATGGAAAATGGAGGGCTTCCTGAAGGCACAAATACACAATCATTGGTTAAGGAAGCCATTCATAACATAAGTTGTGGGTATGAAGAGAAGACTGAATGGGGAAAAGAGATTGGATGGATTTATGGCTCAGTCACAGAAGATATTTTGACTGGATTTAAGATGCACTGCAGAGGATGGAAATCAGTATATTGCATGCCAAAGAGGCCTGCTTTCAAGGGGTCTGCACCTATCAATCTGTCAGATAGGTTGCACCAAGTTCTGAGATGGGCTCTTGGTTCTGTTGAGATTTTCCTTAGTCGCCATTGTCCGTTGTGGTATGGTTATGGAGGAAAACTAAAGTATCTTGAGAGGTTGGCATATACTAATACCATTGTTTATCCATTCACTTCAATCCCTTTGCTTGCATACTGCACAATTCCAGCTGTGTGTCTCCTCACTGGAAAGTTCATCATTCCCACTCTGACCAACCTTGCCAGTATTTGGTTTATGGCACTATTTATATCCATCATTTTAACTGGCGTACTCGAGCTTCGATGGAGTGGAGTTGCCATTGAAGACTGGTGGCGAAACGAGCAATTCTGGGTGATTGGAGGTGTATCAGCACATCTTTTTGCAGTGTTTCAAGGTTTCCTCAAAGTTCTAGCTGGAGTAGACACAAACTTTACTGTCACAGCAAAAGCAGCAGATGATGCTGAGTTTGGAGAGTTATATCTCTTCAAATGGACAACACTTCTCATTCCACCAACAACCCTTATAATCTTGAACATTGTTGGTGTTGTTGCTGGGGTCTCTGATGCTATTAACAGTGGTAGTGGTTCATGGGGACCTTTATTTGGGAAGCTATTCTTTGCATTTTGGGTCATTGTTCATTTATATCCTTTCCTTAAAGGTCTTATGGGAAAACAAAACAGGACTCCTACTATTGTGGTACTTTGGTCAATCCTTTTGGCATCAATTTTCTCATTGATTTGGGTTAGGATTGATCCTTTCTTGCCTAAGCAAACTGGTCCTATTCTCAAACAATGTGGTGTAGAATGCTGA 3135 0.4026 MATNTMAGLITGSNSHFSNDSDEHKPPPTGKSSSKICRVCGDEIGYKENGELFVACHVCAFPVCKPCYEYERSEGNQCCPQCNSRYKRHKGCPRVVGDEDENLDGDDFEDEFPVKNHHDDLDQNRDVNHVENVDYNQQKLHTFSSAGSVTGKDLEGEKEFYSNEEWQERVEKWKVRQEKRGLLNKEDGKEDQGEEDEYLMAEARQPLWRKVPISSSLINPYRIVIVMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYPVEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKVEPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGSRKTKSKKKSGTNGRSLFSKLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKNFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASIWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGFLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01560 1044 Pfam Cellulose synthase 301 1037 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mepo6g01560 1044 MobiDBLite consensus disorder prediction 1 17 - -
Mepo6g01560 1044 Coils Coil 399 419 - -
Mepo6g01560 1044 CDD mRING-HC-C4C4_CesA 35 85 - -
Mepo6g01560 1044 MobiDBLite consensus disorder prediction 1 34 - -
Mepo6g01560 1044 Pfam Zinc-binding RING-finger 30 102 IPR027934 -
Mepo6g01560 1044 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 110 IPR013083 -
Mepo6g01560 1044 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 408 593 IPR029044 -
Mepo6g01560 1044 SUPERFAMILY Nucleotide-diphospho-sugar transferases 315 849 IPR029044 -
Mepo6g01560 1044 FunFam Cellulose synthase 19 111 - -
Mepo6g01560 1044 FunFam Cellulose synthase 418 592 - -
Mepo6g01560 1044 SUPERFAMILY RING/U-box 22 104 - -
Mepo6g01560 1044 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 204 1011 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01560 Mepo-Chr6 17149358 17155038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01560 35 1044 Glycosyltransferase AT5G05170 65.262 0.0 1418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01560 K10999 - gmx:100781996 1929.45