Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01531 ATGCCACCAGCACGAGAGCTTCCAGGATTCTACTTTGATGCAGAGAAGAACAGGTATTTCCCTATCAAAGGTCCCATTCCTGGTTCTTCTTCTTCTTCTTCAAAAACCAAAACCATTACTCCAAAGCCTTCCCAACCTTCTTCCTCTCAGTTACAGGAAAAGAATAGGAGTTCTTATAGGAAGCTTAGAAACAGGACTTCTAAGCTGCTTCAGATTAGGGAGTTAGATGGTCGTCATGTCAATGCCTCACACTATTGCAAGTGTAACTTCACTGAGGAATTCCAGAAAATACAAACATCTCAGCCTGCCGTTTGGAAGTATCAGGGAACCAATAGGATTGGTATTAGTGCTTTGGAACACTTAAATGTTGATGTGCAGACAGCAGAGGGTAGATTTCGAACCGATGTTTTATTGAATGGCAGCATAAATGGCTCACTGAGTTTTTCTGAAGTTGGAAGGATTGGGCAAAATTTCGATGATGGGGTAAAGTGGATGCCTGATTGTGTGAAGAGTCGTATTAAAGGGAAAACAGATGGGCATAACGAAGTGCCAGGGCCGCTTTTCAGACCTAATGGAGCTTCACTGATTATGTCCTCCAGAATATCTTGTATAAGATTGGGTCCAAATGTATCCCCTCATGCTGCGAATGACAGTCCAATTGTTGGAAATGCATTATTTACTACGCTGGGATCAGAAACATCTGGTGGATCTGTTTATACCATCAGTCTTGTTGATCCAATAGATCTTGGACCAGGAATACTGAACACATGGAGCAGACTAGAGGAAATTACGTCTTTCAATAGTACCCTTTGGACAGCTGAATACGATTATAATAGACATCGGGCTATAATTGGTACTAATCAGGGAGGTGCTTCGGTGGATCTTCAAAGTGGGACAAGGTCATGGTTTTTACGTTGTAAAAGTGATATTTTTGCACAACAGATTGTTGATTCAGGAAATGTGATTTTATGTGGACTCAGAAATGGGGCAGTTGTCTCGGTAGATTTTAGAGAGAAAAGATTGCTTTCTAGTAGACTTACTGAGCATAGGATATCATATGTATCTTCAGATAAGAAAGTTGGAAGTTCTAAAAAAGATTGGTTCAAGCTTCAAGGAAGCATATATCCTTCACATACCATTAAGATGCCTTCATCTATATCCAGTTTGGCATCACTTCAATTTGATGATCAGTACTTCTTGGCAAGCTCCATGGATGGATCGATAAGGCTATACGACCGTCGCTTGGTCCAGAGGGGTGCAGTTCAATCTTATGAAGGGCACGTGAATTCCCATACTCAGATACAACTCGGCGTTGACCCAAATGAGAGATATGTTATGTCAGGTGGAGAGGATTGCAAGCTACGGATATGGAGTATCAAGTCTGGTGAATTGCTTTTGGAGGATAAGTTCTCTAATTCAGTTCTCTCCACTGTGTGCTATCAAACATTTAATAAATTTCAAGCAGAGGAAGAAAATGAATACACACATGACTCTTCTTTAGGTGCATGGCTTGGATCACATGAAGGTCTATTCTATATGCACTGGTTATGA 1551 0.4094 MPPARELPGFYFDAEKNRYFPIKGPIPGSSSSSSKTKTITPKPSQPSSSQLQEKNRSSYRKLRNRTSKLLQIRELDGRHVNASHYCKCNFTEEFQKIQTSQPAVWKYQGTNRIGISALEHLNVDVQTAEGRFRTDVLLNGSINGSLSFSEVGRIGQNFDDGVKWMPDCVKSRIKGKTDGHNEVPGPLFRPNGASLIMSSRISCIRLGPNVSPHAANDSPIVGNALFTTLGSETSGGSVYTISLVDPIDLGPGILNTWSRLEEITSFNSTLWTAEYDYNRHRAIIGTNQGGASVDLQSGTRSWFLRCKSDIFAQQIVDSGNVILCGLRNGAVVSVDFREKRLLSSRLTEHRISYVSSDKKVGSSKKDWFKLQGSIYPSHTIKMPSSISSLASLQFDDQYFLASSMDGSIRLYDRRLVQRGAVQSYEGHVNSHTQIQLGVDPNERYVMSGGEDCKLRIWSIKSGELLLEDKFSNSVLSTVCYQTFNKFQAEEENEYTHDSSLGAWLGSHEGLFYMHWL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01531 516 MobiDBLite consensus disorder prediction 26 55 - -
Mepo6g01531 516 Pfam WD domain, G-beta repeat 376 412 IPR001680 GO:0005515
Mepo6g01531 516 Pfam WD domain, G-beta repeat 421 458 IPR001680 GO:0005515
Mepo6g01531 516 PANTHER DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED 1 515 - -
Mepo6g01531 516 Gene3D - 255 509 IPR015943 GO:0005515
Mepo6g01531 516 SUPERFAMILY WD40 repeat-like 235 478 IPR036322 GO:0005515
Mepo6g01531 516 MobiDBLite consensus disorder prediction 22 60 - -
Mepo6g01531 516 SMART WD40_4 417 458 IPR001680 GO:0005515
Mepo6g01531 516 SMART WD40_4 373 412 IPR001680 GO:0005515
Mepo6g01531 516 ProSiteProfiles Trp-Asp (WD) repeats profile. 436 467 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01531 397 469 Miscellaneous Gene Families AT5G08390 30.137 2.28e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01531 K11799 - gmx:100798753 719.924