Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01498 ATGGAGGAGGAGACAAGTCAGTGGAAGCAAGCTTTGATTAATTCATCAGCTGGTGCTATTTCTGGTGCTATTTCACGTACAGTCACCTCACCTCTTGATGTTATCAAGATTAGGTTCCAGGTTCAGCTAGAGCCGACTTCCTTGTGGACGTCACTGCATAGGGATTTGTCTAAACCCTCAAAATATACTGGCATGTTTCAAGCAACCAAAGACATTTTTAGAGAAGAAGGCATACGGGGATTTTGGCGGGGTAATGTGCCAGCTTTGCTCATGGTTATGCCATATACAGCTATACAGTTTACTGTTTTACACAAATTGAAGACTTTTGCCTCTGGTTCATCCAAGACAGAGAATCACATAAATTTGAGCCCTTATCTATCCTATGTAAGTGGGGCGGTAGCTGGATGTGTGGCTACTGTAGGGTCATATCCATTTGATCTTCTTCGAACTATATTAGCTTCTCAGGGTGAACCGAAGGTTTATCCAAACATGAGGTCAGCATCCATTGATATTCTCCAGACCCGTGGGTTTCGAGGCTTGTATTCCGGATTGTCACCGACACTAGTTGAGATTATACCTTATGCAGGCCTACAATTCGGCACTTATGATACATTCAAACGTTGGGCCATGGCGTGGAACCAAGTTCAATATTCAAATACTGCTGCAGAAGAGAGCCTCTCTAGCTTTCAGCTTTTCCTGTGTGGGCTGGCTGCAGGAACATGTGCCAAGCTTGTTTGTCATCCACTTGATGTTGTCAAGAAAAGATTTCAGATTGAAGGTTTGCAAAGGCATCCAAGATATGGAGCTCGGGTTGAGCATCGTGCATATAGAAATATGTTTGACGCCTTGAAACGGATATTACAGAAAGAGGGTTGGGCTGGTCTGTATAAGGGGATAGTTCCATCTACTGTTAAAGCTGCACCAGCTGGTGCTGTAACTTTTGTTGCATATGAATTGACATCAGATTGGCTGGAGTCTATTTTGACTTGA 990 0.4354 MEEETSQWKQALINSSAGAISGAISRTVTSPLDVIKIRFQVQLEPTSLWTSLHRDLSKPSKYTGMFQATKDIFREEGIRGFWRGNVPALLMVMPYTAIQFTVLHKLKTFASGSSKTENHINLSPYLSYVSGAVAGCVATVGSYPFDLLRTILASQGEPKVYPNMRSASIDILQTRGFRGLYSGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNQVQYSNTAAEESLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDALKRILQKEGWAGLYKGIVPSTVKAAPAGAVTFVAYELTSDWLESILT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01498 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 323 IPR018108 -
Mepo6g01498 329 PANTHER SOLUTE CARRIER FAMILY 25 8 324 - -
Mepo6g01498 329 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Mepo6g01498 329 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Mepo6g01498 329 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Mepo6g01498 329 PRINTS Mitochondrial carrier protein signature 181 199 IPR002067 GO:0055085
Mepo6g01498 329 PRINTS Mitochondrial carrier protein signature 235 257 IPR002067 GO:0055085
Mepo6g01498 329 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Mepo6g01498 329 SUPERFAMILY Mitochondrial carrier 9 318 IPR023395 -
Mepo6g01498 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 208 IPR018108 -
Mepo6g01498 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 109 IPR018108 -
Mepo6g01498 329 Pfam Mitochondrial carrier protein 226 324 IPR018108 -
Mepo6g01498 329 Pfam Mitochondrial carrier protein 8 110 IPR018108 -
Mepo6g01498 329 Pfam Mitochondrial carrier protein 123 209 IPR018108 -
Mepo6g01498 329 Gene3D Mitochondrial carrier domain 5 326 IPR023395 -
Mepo6g01498 329 FunFam Mitochondrial thiamine pyrophosphate carrier 1 5 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01498 Mepo-Chr6 16357424 16364278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01498 3 329 Organic Solute Cotransporters AT3G21390 74.320 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01498 K15108 - gmx:100803750 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01498 6 16357424 16364278 Mepo6g01498 6 16357424 16364278 ECH
Mepo1g00768 1 7278644 7284275 Mepo6g01498 6 16357424 16364278 PCT