Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01482 ATGGGTATGACCACAAGCAACCGTAAACGCTCTGAAGAATGCATGTCCGTCCTCAACAATCACACCACCATCTCTATTTCTCAACCATCTTCAAAACGACCCAAATTTTCATACCAATCGACCCGACCCGTTTCCACCTCAAACGCCATCGTTTCCAGACTCTCCCGTTACCCAGACACCAAACCCCAATTCCTCCGTGAAGTTCACGCGCCGTGTAGACCTAAAAAATTCAACTTTTCCAGAAAATTATCAAATTTCGGCGAATTCGTTGACATGGGTAATTTGCTGATGAGGAATTTCGAGAAGGCGAAGCGTTCGGCGTTGGGGAAATGCAGATTGGTGACCCAGAAGGAGAAGGTGGTGATTGATTTGGATTCAGATGGGGAGGATTCGGATGATTCTGGTGTTGTGGAGGTTATTGAGATTCGTGATACGGATATGAAGGATGTTGAAATTGGGGTTCAACGGAGGTTAACGGATTCGCCGGATTCGGCTTTGACTAATGCGGTGGTGAATGTGGAGGACCATGATCTTTCCAGTGTTCATGTGTATAAGAAGTTGCTTCAGGGTGTTCAGAGAAGGACTGATACAATTCAAAGTTTGAGTTTTCAAATTGAGTTGAATGAGAAGAGAAGAGATATTTTTCAATTGTTAAGGCCTAAGAAGGAACTTATTGAGGAAGTGCCATTTGAGCCTTTTGTCCCTCTAACAGATGATGATGAACAGGAGGTTTCTTGCGCGTTTTCCTCCGACCGGAGGAAGATATTGGTTGCTCATGAGAGTTCTAATATTGAGGTATCAGGACAAAAGATGCGGTGCCTTCTCCCGGGTGCATGGTTAAATGATGAGGTGATAAATTTGTACCTCGAGTTGCTGAAAGAGAGGGAGCGAAGAGAACCCAAGAAGTTTCTGAAATGTCATTTTTTCAGCACCTTTTTCTACAAAAAGTTAATAAGTGGCAGGGATAGATATGATTACAAATCTGTCCGAAGATGGACGACTCAAAGGAAATTGGGATACAGCCTATTTGATTGTGATAAAATATTTGTGCCCATCCACCAAGAAATTCACTGGTGCTTGGCAGTTATCAATAAAAGAGATGCAAAATTCCAGTATCTTGACTCATTGAAAGGAATGGATAGCCGTGTGCTAGAAGTGCTGGCTAGGTACTATGTAGACGAAGTAAAAGACAAAACTGGAAAAGATATTGATGTAAGCACCTGGGAGAAAGAATATGTCGAAGACCTTCCTGAGCAGGAAAATGGGTTCGATTGCGGCGTGTTTATGATCAAATATGCCGACTTCTATAGCAGAGGCCTGGGTCTGTGTTTTAACCAGGAACACATGCCTTACTTCCGGCGCAGGACAGCTAAGGAGTTATTGAGATTGAGAGCTGACTAA 1401 0.4325 MGMTTSNRKRSEECMSVLNNHTTISISQPSSKRPKFSYQSTRPVSTSNAIVSRLSRYPDTKPQFLREVHAPCRPKKFNFSRKLSNFGEFVDMGNLLMRNFEKAKRSALGKCRLVTQKEKVVIDLDSDGEDSDDSGVVEVIEIRDTDMKDVEIGVQRRLTDSPDSALTNAVVNVEDHDLSSVHVYKKLLQGVQRRTDTIQSLSFQIELNEKRRDIFQLLRPKKELIEEVPFEPFVPLTDDDEQEVSCAFSSDRRKILVAHESSNIEVSGQKMRCLLPGAWLNDEVINLYLELLKERERREPKKFLKCHFFSTFFYKKLISGRDRYDYKSVRRWTTQRKLGYSLFDCDKIFVPIHQEIHWCLAVINKRDAKFQYLDSLKGMDSRVLEVLARYYVDEVKDKTGKDIDVSTWEKEYVEDLPEQENGFDCGVFMIKYADFYSRGLGLCFNQEHMPYFRRRTAKELLRLRAD 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01482 466 ProSiteProfiles Ubiquitin-like protease family profile. 264 436 IPR003653 GO:0006508|GO:0008234
Mepo6g01482 466 Pfam Ulp1 protease family, C-terminal catalytic domain 279 459 IPR003653 GO:0006508|GO:0008234
Mepo6g01482 466 FunFam Ubiquitin-like-specific protease ESD4 222 464 - -
Mepo6g01482 466 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 118 459 - -
Mepo6g01482 466 SUPERFAMILY Cysteine proteinases 232 464 IPR038765 -
Mepo6g01482 466 Gene3D Adenoviral Proteinase; Chain A 233 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01482 Mepo-Chr6 16124562 16130156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01482 K08592 - gmx:100802161 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00752 1 7161274 7166695 Mepo6g01482 6 16124562 16130156 PCT