Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01473 ATGCTTACAGAACTTATGAGCACTAATGTCTCATCTAACCATCTTTTTGCAGTGCTTTTGGTAGTAGGTTTAGCAACCCTTTACTTTGCATGTAGAAGAAAAGTACACATTTATTTGATTGATTTTAACTGCTTTTGCCCCCCAAGTTCATATAGACTACCTAAAGCCATGTTTGAAGAGAACAATTATTTTGATGATATGGAACAAGAAGCTGTTGATTTCCAAAGCAAAATCAGTGCAAAATCTGGATTCAGTGATGAAACATCCATTCCTCCATCTCTTGCTCAAATACCTAAAAGTAAAGCTCTCACTTTTGCACTTGAAGAAGCTGAATTAATAATGTATTCAGCAATAAAAGACCTTTTACAAAAAACCAAAATCAACCCAAAATCCATTGACATTGTAATAACCATTAGTAGCATCTTCTGTCCTACACCATCTCTTAGTTCCATGGTGGTTAACAATTTCAAGATGAGAAGCAACATCATGAGCTTTCATCTATCAGGTATGGGATGCAGTGCTGGAATTATAGCTGTTGGTCTTGCAAAAGACTTGTTGAGAGTTCATAGAAACTCATTGGCCTTAATAGTAAGCACAGAGACACTTAGTTTAAATTGGTACACAGGTAAAGTTCCATCTATGCTACTAACTAATTGTCTATTCAGAATGGGAGGATCAGCTATATTGATGTCAAGCAAGGTTCAAGATAAGCATAAGGCAAAGTATGAGCTAAAGCATATTGTTAGAACAATCAATGCATATGATGATCAATCTTATGCATGTGTATACCAGGATGTGGATCCAGAGAGCAAAGAAGGTGTATCGATATCGAAGAACATAGTCAATGTTTGTGGAGATGTGTTGAAGAAAAATATTGCTTCATTGGGACCATTGGTTTTACCATGGAGGGAGCAATTCCTATATGTAGTTTCAATTATTTATCACAAACTTTGGAGTAGAAGAACAGGCATATATACTCCAAAATTCAATAGGGCTTTTGAGCATTTCTGCATACATTCAGGAGGAAGAGCTGTTATACAAGCCATTGAGAAAAATTTGAAGCTAAGGAGAGAGGATGTTGAGCCATCAAAAATGACTCTGTACAGATTTGGAAACACTTCATCTTCTTCAATTTGGTATGAGTTGTCATACATTGAAGCAAAAGGGAGGATGAAATATGGAGATAGGGTGTGGCAAATTGCCTTCGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTTTAGGTGACGTGAAGCCTGATACCACCACTGCATGGAGAGACACAATTCACACATACCCGATAGATATTTTAGGGACACGCTGA 1329 0.371 MLTELMSTNVSSNHLFAVLLVVGLATLYFACRRKVHIYLIDFNCFCPPSSYRLPKAMFEENNYFDDMEQEAVDFQSKISAKSGFSDETSIPPSLAQIPKSKALTFALEEAELIMYSAIKDLLQKTKINPKSIDIVITISSIFCPTPSLSSMVVNNFKMRSNIMSFHLSGMGCSAGIIAVGLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLTNCLFRMGGSAILMSSKVQDKHKAKYELKHIVRTINAYDDQSYACVYQDVDPESKEGVSISKNIVNVCGDVLKKNIASLGPLVLPWREQFLYVVSIIYHKLWSRRTGIYTPKFNRAFEHFCIHSGGRAVIQAIEKNLKLRREDVEPSKMTLYRFGNTSSSSIWYELSYIEAKGRMKYGDRVWQIAFGSGFKCNSAVWKCLGDVKPDTTTAWRDTIHTYPIDILGTR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01473 442 PANTHER 3-KETOACYL-COA SYNTHASE 14 437 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo6g01473 442 SUPERFAMILY Thiolase-like 26 233 IPR016039 GO:0016746
Mepo6g01473 442 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 333 414 IPR013747 -
Mepo6g01473 442 SUPERFAMILY Thiolase-like 245 415 IPR016039 GO:0016746
Mepo6g01473 442 Pfam FAE1/Type III polyketide synthase-like protein 30 316 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mepo6g01473 442 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 441 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo6g01473 442 Gene3D - 50 414 IPR016039 GO:0016746
Mepo6g01473 442 CDD CHS_like 17 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01473 Mepo-Chr6 16049687 16051015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01473 28 436 Acyl Lipid Metabolism Gene Families AT1G71160 53.171 2.75e-165 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01473 K15397 - gmx:100783404 697.197