Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01389 ATGGCTTTGCAGAAGTACGTTCCATCCGGCAATGCACCTACTGTTAGTTTGAAACATTTGAGTTCCAGTAAGGCCCCTGAGAAAACTCAGCCTGACGTGGAAAATCAGAATCATGACATGGATGTGGATGTTGACCTTGGGGAAGTTTATTTTCTCATTATGCGCTTCCTTTCTGCTGGGCCATGTCATAAAACTTGTTCACATCTTTGGAATGAGCTTCTGGAGAATCAACTTTTGCCTAGAAGGTATCATGCTTGGTATTCAAGGAGTGGGGCATCCAGTGGAGTTCCACATGACGATGGTCAATCATTCCCTTTAGAAGATTACAATAAGTTGGTGGAGAGGTATCCTCATATTGAAAAGGATCACCTGGTAAAGCTTTTGAAGCAATTGTTATTAAATAAAGCCTCCCTGTCACCAGGCATGAGTACTGGAAATCCTCCAAATGCAGCTGATGTACCCACTCTTCTAGGAAGGGGATCATTTTCACTTCTGAGCTATGACGGGGATAAAGTGAATGAAGAAGTTAAACCACCACCTCCTTATATGCGCTGGCCGCATATGAAAGCCAATCAGGTTCATGGGCTTAATTTGAGGGAAATCGGGGGTGGTTTTCCAAGACACCACCGTGCACCATCTATACGTGCTGCATGCTATGCCATTGCAAAACCTTCTACTATGGTACAGAAGATGCAAAACATCAAAAGAATAAGAGGACACTGTAATGCTGTTTATTGTGCTATATTTGATCGGTCAGGAAGATATGTTATTACCGGTTCAGATGATCGACTCGTAAAAATTTGGTCAATGGAAACTGCATATAGTTTGGCCAGTTGCCGTGGACACGTTGGTGACATTACTGACTTGGCTGTGAGTTCAAACAATGCTTTAGTTGCATCCTCATCAAATGATTATATTATTCGAGTTTGGCGCTTGCCAGATGGCTTACCGATATCAGTTTTACGGGGGCATACTGGAGCTGTTACAGCCATAGCCTTTAGTCCCAGACCTAATGCTGTTTACCAGCTTTTATCCTCCTCTGACGATGGAACTTGTAGGATATGGGATGCAAGGTATACCCACTCAAGGCCAAGATTATATGTTCCAAAGCCGTCTGATTCTACTGGAAGGAGCAGTGGCCCATCCTCAAATACAATGCCACGGAGTCATCAAATTTTTTGCTGTGCATTTAATGCTAATGGAACTGTCTTCGTCACTGGTAGCTCTGATAATCTTGCCAGGGTTTGGAATGCTTGTAAACTTAGTATGGAAGACATTGAGCAACCAAATCATGAGATAGATGTACTGTCTGGTCATGAAAATGATGTAAACTATGTGCAATTTAGTGGATGTGCAGTAGCATCTCGTTTTTCCTTAACAGAAACTTGGAAGGAAGATAATATTCCCAAATTTAAGAATTCCTGGTTGAATCATGACAACATAGTTACCTGCTCTCGTGATGGGAGCGCTATTATATGGATTCCAAAATCACGCAGGTCACATGGAAAAAGTGGTCGCTGGACTCGGGCATATCATCTCAGAGTTCCACCTCCTCCTATGCCTCCACAACCTCAGAGAGGTGGTCCACGCCAGAGAATTCTACCAACTCCACGCGGTGTAAATATGATTGCTTGGAGCCTAGACAACCGCTTTGTCCTTGCAGCTATTATGGATTGCAGAATCTGTGTTTGGAATGCTTCTGATGGCAGCTTAGTGCACTCATTGACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCTTTTAATCCGCGGATAGTAATGAGTGCTGGATATGATGGAAGAACTATTGTATGGGATATATGGGAAGGCTTGCCTATCAGGATATTTGAGATTTCACGTTTCAAGATGGTGGATGGAAAATTTTCTCCGGATGGGACATCAATCATACTATCTGATGATGCTGGTCAACTATATATATTGAACACGGGCCAAGGTGAATCCCAGCAAGATGCCAAATATGATCAGTTCTTTCTTGGTGATTATCGGCCTCTCATTCAAGACACGCATGGTAATGTACTTGACAAGGAAACTCAGATCACTCCATATCGGCGTAATTTGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAACCTTATCAGAGTGAATTTCAGCGGAGACGACTAGGAGCTTTAGGCCATGATTGGCGCCCGTCACCACTAAAGCTTGCTATTGGCACTGATTTTAGCCTGGACCCAGCATATCATATGCTTCCATTGGCTGACTTGGACCAGCTAGCAGAACCCCTACCAGAGTTTATAGATGCTATGGATTGGGAGCCAGACATTGAAGTGTTAGTTGATGATACCGATTCAGAATATAATTTAACTGATGATAGTTCTTCCCGGGGTGAGAAAGGATGTTCAAGCTCCAATGCCTCTGGTGATCCTGGTTGCAGCACAGATAACAGTGATGATGAAGACACTCACATGGATTGCATTCGTAGATCGAAGAGGAAAAAGCAGAAGACCGGCATTGAGACTATGACTTCTTCTGGGAGACGTGTTAAAAGGAGGAATTTGGATGAGTGTGAAGGCAATGTTCACAGTAGTAGCCGAAGTAGGAAGGGAAAAAGTGGAAAAAAAACATCAAGGAGGAAATCTTCAAAATCAAAATCTTCCAGACCTCGAAGAGCTGCTGCACGCAATGCTCTGCATTTATTCTCAAAAATTACAGGTACACCAAATGAAGGAGAAGAAGATAGTTTGGTTGGTGATTCTTCAGATAGTGACTCAACATTGCAAGAGTCTAATATTGACAGTGATGAATCCGGTAGAGCTTCCCAAAATGACCAACGGAATTATTCCAAGGGAAAAGAAGTATTACTGTATGAATCAGAGGACTCAAAATCTCATGAATTGACCGAGACTCGTGTAAACAGGAGGAGGTTGGTTCTCAAATTGCCAATTCGGGATTCATCTAAACCTGCGCACGAGTTTGAGAACCAGGCTGAGTTGGTAGGCTCATCGTCAAAAACTGCACAAGAATCTCCTGATTTTAATAGGAACAGACCAAGTTCTACAGAGCCAGGATATTGTTTGGGCAATGGAAGTTACTCTTCAATTGAAAGAACTGATCAAGTAAAACTTGACAAGGTAACAGACCATGTAGACTTGCTAGAAAAACTTAGATGGGGGGTGGTTAGAGCTCGTTCAGCTAAACCTCTCAGGATGAGAGATGTGCCACTAGGTGCAAATCCCAACTCTGTAGAATGTCCTAACCATCTCAATGAAGAAGAAATTGTTAGTATTGAGCATGAGAGAGAGGACAAGGACTTTAGCGGTACATCAACCCCTGCTTTAGAAATTCAAAATGGTGATAAGGTAGATAGTTTGTCAGGAATAAATGAAAATTGTGCTGGCACTACCTCTCAGACTTTCAATCTTACTGAGAATGGAGAACCACTCACAGCTTCCAGCAATTACAGGGATCAAGATGAATCACTAGTTTCTGCAAGCATGATTCCTGAGAATAATATTCTTGTACCTGTCGGTCAAAGTGGGGCTGACCAACTACCTGAACCAAATATTGGTTTTCCTTCTGTTTCAACAAAGTTAAGGTCTAAAAGGGGTACAAGGAACCCTGAAAGTCCATGTAAGCCTGAAACAAAATCTTCAGTGCTAAACAATAATGCATCTAGCAGTAATGCTAATATTAATTTGAACAATGAAGAGCATGTGGTTTTGGTTAAGGATGACAACAATACTGGAGTAACATCTAATCAGAGAGAAAATGGTTCTCCAGAAGTTGTTGTTCAGGCTAAACAAGTTAGTACTTCTCATGATTCTCTAGAACCACATTCAAATAGAGATAAAATGTTCAAAGCAGTTTATAGAAGATCAAGATCACATAGGGCTGTGACTAATTTAGCTGATGGTAGTGGCTTGGGAGAATCCACTTCAAATGGCAGCAACAGTAATTTTAATGTGGCAGTGGACAGTAATGGCACAAATGAAGCTCTTCATACCAATGGTTCCCTAGAGTTGGAACAAGGTACTTGTGTCCCAAATAGTGAGCAGAGTAATCTTAAAGTGCAGCAAGGAAATGGGTCTTGTATTGTTAGAATTCCTCAGAATGTTTCCCCAAATAAAGGAAAACTCACAGAAGAAGAAAGGGGTTCTAGTTCAAAATTGACTGTCGGTTTGAGGTCCACTAGGAATCGGAGGTCTACTTATAATATCCGTGAGACTAGTCCTGTAAATAGACGGAAATCACTACAATCTGCGGTGAAGGGGTCCTGGTTGCTGTTATCAACACATGAGGAAGGATGTAGATATATTCCTCAACAGGGCGATGAAGTTGTATATCTAAGACAGGGACACCAGGAGTATATAGAGTACAGCCATAAAAGAGAGTCGGGGCCTTGGGTGTCACTTAAGGAACATCTAAGAGCTGTTGAATACTGTAGAGTTCAAAGCCTTGAGTATTCTCATGTTCCAGGGTCTGGTGATAGCTGCTGCAAAATGACCCTCGAGTTTTTAGATCCAAATTCAAGTGTTGTTGGCAAAACTTTTAAATTAACCCTACCTGAAGTGACTGGTTTCCCTGATTTTCTTGTTGAAAGAACTAGGTTTGATGCTGCTATCCAAAGAAATTGGACACGCAGGGATAAATGCAGGGTTTGGTGGAAGAATGAGGATAACTCCTCCGGTAATTGGTGGGAGGGACGGATTCAGTTTGTAAAAGCCAAATCATCTGAATTTCCAGACAGTCCATGGGAGAGATACAGTGTTCGGTACAAGAGCGACCTCTCTGATGAACATTTGCATAGTCCTTGGGAGCTTTTTGATGCTGATACTCAATGGGAACAGCCTCATATTGATGATCACACAAGAAATAAACTGCTATCTGCTCTCACCAAAGTACAGCAGTCAGGAAACACAGTTCAGGATCGCTATGGATTGCATGAATTGGAGAAAATTTCAAATAAATCAAAATTTACAAACAGATTTCCTGTTCCTTTGTCAATTGAATTGATACAATCAAGGTTGGAGAATAGTTATTACCGAAGTTTGGAGGCACTTAAGCATGATGTCTCAATTCTACTGACCAATGCCAACTCGTTTTTTGAAAAGGATGTAGTGATGACAACCAAAATCAAACACCTATCAGAGTGGTTCACTAGGACTTTATCATCTCTATAA 5178 0.4171 MALQKYVPSGNAPTVSLKHLSSSKAPEKTQPDVENQNHDMDVDVDLGEVYFLIMRFLSAGPCHKTCSHLWNELLENQLLPRRYHAWYSRSGASSGVPHDDGQSFPLEDYNKLVERYPHIEKDHLVKLLKQLLLNKASLSPGMSTGNPPNAADVPTLLGRGSFSLLSYDGDKVNEEVKPPPPYMRWPHMKANQVHGLNLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSRPRLYVPKPSDSTGRSSGPSSNTMPRSHQIFCCAFNANGTVFVTGSSDNLARVWNACKLSMEDIEQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLTETWKEDNIPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIVMSAGYDGRTIVWDIWEGLPIRIFEISRFKMVDGKFSPDGTSIILSDDAGQLYILNTGQGESQQDAKYDQFFLGDYRPLIQDTHGNVLDKETQITPYRRNLQDLLCDSAMIPYPEPYQSEFQRRRLGALGHDWRPSPLKLAIGTDFSLDPAYHMLPLADLDQLAEPLPEFIDAMDWEPDIEVLVDDTDSEYNLTDDSSSRGEKGCSSSNASGDPGCSTDNSDDEDTHMDCIRRSKRKKQKTGIETMTSSGRRVKRRNLDECEGNVHSSSRSRKGKSGKKTSRRKSSKSKSSRPRRAAARNALHLFSKITGTPNEGEEDSLVGDSSDSDSTLQESNIDSDESGRASQNDQRNYSKGKEVLLYESEDSKSHELTETRVNRRRLVLKLPIRDSSKPAHEFENQAELVGSSSKTAQESPDFNRNRPSSTEPGYCLGNGSYSSIERTDQVKLDKVTDHVDLLEKLRWGVVRARSAKPLRMRDVPLGANPNSVECPNHLNEEEIVSIEHEREDKDFSGTSTPALEIQNGDKVDSLSGINENCAGTTSQTFNLTENGEPLTASSNYRDQDESLVSASMIPENNILVPVGQSGADQLPEPNIGFPSVSTKLRSKRGTRNPESPCKPETKSSVLNNNASSSNANINLNNEEHVVLVKDDNNTGVTSNQRENGSPEVVVQAKQVSTSHDSLEPHSNRDKMFKAVYRRSRSHRAVTNLADGSGLGESTSNGSNSNFNVAVDSNGTNEALHTNGSLELEQGTCVPNSEQSNLKVQQGNGSCIVRIPQNVSPNKGKLTEEERGSSSKLTVGLRSTRNRRSTYNIRETSPVNRRKSLQSAVKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIEYSHKRESGPWVSLKEHLRAVEYCRVQSLEYSHVPGSGDSCCKMTLEFLDPNSSVVGKTFKLTLPEVTGFPDFLVERTRFDAAIQRNWTRRDKCRVWWKNEDNSSGNWWEGRIQFVKAKSSEFPDSPWERYSVRYKSDLSDEHLHSPWELFDADTQWEQPHIDDHTRNKLLSALTKVQQSGNTVQDRYGLHELEKISNKSKFTNRFPVPLSIELIQSRLENSYYRSLEALKHDVSILLTNANSFFEKDVVMTTKIKHLSEWFTRTLSSL 1725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01389 1725 FunFam WD40/YVTN repeat-like-containing domain 1619 1725 - -
Mepo6g01389 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 237 278 IPR001680 GO:0005515
Mepo6g01389 1725 SUPERFAMILY Bromodomain 1657 1723 IPR036427 GO:0005515
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 1209 1233 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 1 39 - -
Mepo6g01389 1725 CDD Bromo_WDR9_I_like 1597 1725 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 784 949 - -
Mepo6g01389 1725 Pfam Bromodomain 1658 1711 IPR001487 GO:0005515
Mepo6g01389 1725 Pfam WD domain, G-beta repeat 388 417 IPR001680 GO:0005515
Mepo6g01389 1725 Pfam WD domain, G-beta repeat 569 608 IPR001680 GO:0005515
Mepo6g01389 1725 Pfam WD domain, G-beta repeat 232 269 IPR001680 GO:0005515
Mepo6g01389 1725 Pfam WD domain, G-beta repeat 276 310 IPR001680 GO:0005515
Mepo6g01389 1725 Pfam WD domain, G-beta repeat 317 356 IPR001680 GO:0005515
Mepo6g01389 1725 Gene3D - 386 520 IPR015943 GO:0005515
Mepo6g01389 1725 PANTHER WD REPEAT DOMAIN 9 36 1720 - -
Mepo6g01389 1725 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 279 312 - -
Mepo6g01389 1725 FunFam PH-interacting protein isoform X1 212 380 - -
Mepo6g01389 1725 CDD WD40 233 608 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 865 890 - -
Mepo6g01389 1725 ProSitePatterns Trp-Asp (WD) repeats signature. 595 609 IPR019775 -
Mepo6g01389 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 575 609 IPR001680 GO:0005515
Mepo6g01389 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 321 356 IPR001680 GO:0005515
Mepo6g01389 1725 SUPERFAMILY WD40 repeat-like 228 653 IPR036322 GO:0005515
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 843 863 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 9 30 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 366 386 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 372 386 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 1183 1233 - -
Mepo6g01389 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 385 417 IPR001680 GO:0005515
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 918 947 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 995 1030 - -
Mepo6g01389 1725 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 321 356 - -
Mepo6g01389 1725 ProSiteProfiles Bromodomain profile. 1665 1708 IPR001487 GO:0005515
Mepo6g01389 1725 Gene3D - 1625 1725 IPR036427 GO:0005515
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 987 1030 - -
Mepo6g01389 1725 Gene3D - 530 664 IPR015943 GO:0005515
Mepo6g01389 1725 Gene3D - 212 385 IPR015943 GO:0005515
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 1366 1395 - -
Mepo6g01389 1725 FunFam WD40 domain-containing protein 381 461 - -
Mepo6g01389 1725 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 237 272 - -
Mepo6g01389 1725 SMART WD40_4 230 269 IPR001680 GO:0005515
Mepo6g01389 1725 SMART WD40_4 314 356 IPR001680 GO:0005515
Mepo6g01389 1725 SMART WD40_4 272 311 IPR001680 GO:0005515
Mepo6g01389 1725 SMART WD40_4 568 608 IPR001680 GO:0005515
Mepo6g01389 1725 SMART WD40_4 527 565 IPR001680 GO:0005515
Mepo6g01389 1725 SMART WD40_4 429 494 IPR001680 GO:0005515
Mepo6g01389 1725 SMART WD40_4 379 417 IPR001680 GO:0005515
Mepo6g01389 1725 FunFam PH-interacting protein isoform X1 468 666 - -
Mepo6g01389 1725 MobiDBLite consensus disorder prediction 792 811 - -
Mepo6g01389 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 279 320 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01389 Mepo-Chr6 15043375 15058433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01389 229 417 Miscellaneous Gene Families AT5G08390 23.684 6.19e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01389 K11797 - gmx:100818665 2671.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01389 6 15043375 15058433 Mepo6g01389 6 15043375 15058433 ECH