Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01388 ATGCCTTCTTTCTTTGCTCCAACCACGAGGTTCTCTTTGGTTACTCCTCTGTTTCTATTGGGATTGTTCACAATAAACCTTATTCCCATGGCAGATGCTCAAATAGGAGTATGTTATGGTATGATGGGAAACAATCTACCACCGGCAAACGAAGTTATAAATCTCTACAAAGCAAACAACATTAAGAGAATGAGACTTTATGATCCTAATCAAGCTGCTCTAAATGCATTAAGAAATTCAGGCATTGAACTCATTCTTGGTGTGCCTAATTCCGACCTTCAAACCCTAGCGACCAACTCTGATAATGCACGTCAATGGGTACAAAGAAATGTATTGAACTTTTGGCCTAGTGTCAAAATCAAGTATATTGCAGTTGGTAATGAAGTGAGTCCAGTTGGAGGCTCTTCTTGGCTAGCCCAATATGTTCTACCTGCCACCCAAAATATATATCAAGCAATAAGAGCTCAAGGTCTTCATGATCAAATCAAGGTTTCAACCGCTATTGACATGACCCTTATTGGAAACTCATTCCCTCCATCTAAAGGTTCTTTTAGAAATGATGTTAGGGCATACCTAGACCCTTTCATTGGATACTTGGTATATGCAGGTGCACCTTTACTTGTCAATGTTTACCCTTATTTTAGCCATGTTGGTAACCCACGTGATATATCTCTTCCTTATGCTCTTTTCACTTCACCGGGTGTTATGGTACAAGATGGTCCAAATGGGTACCAAAACTTGTTTGATGCTATGTTGGATTCGGTGCATGCAGCCCTAGATAACACTGGGATTGGTTGGGTGAACGTTGTTGTGTCTGAGAGTGGCTGGCCCTCTGATGGAGGGGCGGCTACTTCATATGACAACGCACGTATTTATCTTGATAATTTGATTCGTCATGTTGGTAAAGGTACTCCACGAAGGCCTTGGGCTACAGAAACTTATATTTTCGCTATGTTTGATGAGAACCAAAAGAGTCCGGAATTGGAGAAACATTTTGGAGTGTTTTATCCTAATAAACAAAAGAAGTACCCATTTGGATTTGGTGGGGAAAGAAATGGGGAAATTGTCAATGGTGATTTCAATGCAACTATTTCTCTTAAGAGTGACATGTAA 1113 0.4034 MPSFFAPTTRFSLVTPLFLLGLFTINLIPMADAQIGVCYGMMGNNLPPANEVINLYKANNIKRMRLYDPNQAALNALRNSGIELILGVPNSDLQTLATNSDNARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNIYQAIRAQGLHDQIKVSTAIDMTLIGNSFPPSKGSFRNDVRAYLDPFIGYLVYAGAPLLVNVYPYFSHVGNPRDISLPYALFTSPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGAATSYDNARIYLDNLIRHVGKGTPRRPWATETYIFAMFDENQKSPELEKHFGVFYPNKQKKYPFGFGGERNGEIVNGDFNATISLKSDM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01388 370 SUPERFAMILY (Trans)glycosidases 35 346 IPR017853 -
Mepo6g01388 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 24 347 IPR044965 GO:0004553|GO:0005975
Mepo6g01388 370 FunFam glucan endo-1,3-beta-glucosidase, basic 35 347 - -
Mepo6g01388 370 ProSitePatterns Glycosyl hydrolases family 17 signature. 267 280 IPR000490 GO:0004553|GO:0005975
Mepo6g01388 370 Gene3D Glycosidases 34 348 - -
Mepo6g01388 370 Pfam Glycosyl hydrolases family 17 35 345 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01388 Mepo-Chr6 15027779 15031006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01388 41 356 Glycoside Hydrolase AT4G16260 63.009 3.36e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01388 - - tpra:123885520 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01388 6 15027779 15031006 Mepo6g01388 6 15027779 15031006 ECH