Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01387 ATGATCACAAGCAACAGTGCTGTAATGGCTTCTCTACTGCTACTATTTGCTCTGTTTACGGTAAATCTTCGCTTGACAAGTGCTCAAATAGGTGTTTGTTATGGCATGATGGGAAACAATCTACCTTCACAACGTGAAACAATAGATCTTTGCAAATCAAACAACATCAAAAGAATGAGGCTATATGATCCAAACCAAGCTGCTCTTGAAGCACTTAGAAACTCTGGCATTGAGCTTATGCTAGGTGTGCCAAATTCTGATCTTCAAAACATTGCTACCAACAATGACATTGCAATTCAATGGGTACAAAAAAATGTACTAAACTTCTACCCTAGTGTCAAAATCAAATACATCGCGGTCGGTAACGAAGTTAATCCAGTTGGCGGCTCTTCTCAATTTGCAAAATATGTTCTTCCGGCAATCCAAAACATATATCAAGCAATAAGAGCAAAAAATCTTCACGAACAAATCAAGGTTTCAACGGCAATTGACATGACCATGATAGGAAATTCATACCCGCCGTCTAAAGGTTCATTTAGAAGCGATGTGAGGTCATATTTGGATCCAATTATAGGCTACTTAGTGTATGCAAATGCACCTTTATTTGCAAATATTTACTCTTATTTTAGCTATAAAGATAACCCAAAAGACATCTCACTTCAATATGCTTTATTCACTTCTCCTAATGTTGTGGTTTGGGATGGTTCAAGGGGATACCAAAATCTATTTGATGCTTTGTTGGATTCATTACATGCTGCAATTGATAATACTGGAATAGGTTTTGTTAAGGTTGTTGTGTCTGAAAGTGGTTGGCCTTCAGATGGTGGATTTGCAGCTACTTATGATAATGCAAGAGTTTATCTTGATAATTTGATTAGGCATGTTAATGGTGGGACACCAATGAGGTCTGGACCTATTGAGACTTATATATTTGGATTGTTTGATGAGAATCAGAAGAATCCTGAGTTAGAGAAACATTTTGGAGTGTTTTATCCTAATAAACAGAAAAAGTATCCATTTGGATTTCAGGGGAAAATTGATGGTACTAATTTGTTTAATGTGTCTGTTCCTCTTAAGAGTGACATTTAA 1089 0.3636 MITSNSAVMASLLLLFALFTVNLRLTSAQIGVCYGMMGNNLPSQRETIDLCKSNNIKRMRLYDPNQAALEALRNSGIELMLGVPNSDLQNIATNNDIAIQWVQKNVLNFYPSVKIKYIAVGNEVNPVGGSSQFAKYVLPAIQNIYQAIRAKNLHEQIKVSTAIDMTMIGNSYPPSKGSFRSDVRSYLDPIIGYLVYANAPLFANIYSYFSYKDNPKDISLQYALFTSPNVVVWDGSRGYQNLFDALLDSLHAAIDNTGIGFVKVVVSESGWPSDGGFAATYDNARVYLDNLIRHVNGGTPMRSGPIETYIFGLFDENQKNPELEKHFGVFYPNKQKKYPFGFQGKIDGTNLFNVSVPLKSDI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01387 362 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Mepo6g01387 362 SUPERFAMILY (Trans)glycosidases 30 341 IPR017853 -
Mepo6g01387 362 Pfam Glycosyl hydrolases family 17 30 340 IPR000490 GO:0004553|GO:0005975
Mepo6g01387 362 FunFam glucan endo-1,3-beta-glucosidase, basic 30 342 - -
Mepo6g01387 362 Gene3D Glycosidases 29 343 - -
Mepo6g01387 362 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 342 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01387 Mepo-Chr6 15020340 15022116 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01387 36 349 Glycoside Hydrolase AT4G16260 63.407 2.49e-146 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01387 - - gmx:100801599 553.518