Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01314 ATGGTGAAGGTTCGTATGAACACGGCGGATGTGGCGGCCGAAGTGAAATGTCTCCGACGTTTAATCGGAATGCGATGTTCCAATGTTTATGATCTCACTCCCAAGACGTACGTTTTCAAGCTTATGAATAGTAGTGGAATGACTGAATCTGGTGAGAGCGAGAAGGTTTTGTTGCTCATGGAAAGTGGTGCTAGATTGCACACTACTGTCTATATGCGTGACAAAAGCAACACTCCTTCTGGTTTTACACTTAAATTGAGGAAACATATTCGAACTAGAAGGCTTGAGGATGTGCGACAACTTGGGTATGATCGGATTGTTCTATTTCAATTCGGACTTGGGGAGAATGCAAACTATGTTATACTAGAGCTATATGCTCAAGGCAACGTCATCCTCACGGATTCTAGTTTCACTGTCTTGACTCTACTTCGTTCTCACAGGGATGATGATAAGGGGCTTGCAATCATGTCACGCCATCGTTATCCTGTAGAAAGTTGTCGAGTTTTTGAGCGAACAACTACAACAAAGCTGCAGACAGCCCTAACATCTTCCAAGGAAGATGACAATGATGAGGCTGTTAAGGCCAATGGAAATGGAACTGATGTTTCCAATGTAGAAAAAGAGAAGCAGGGATCCAAAAAAGGTGGGAAGTCATATGCCACTTTGAAAATTATCCTCGGGGAGGCACTCGGTTATGGACCTGCACTGTCTGAGCACATGATATTAGATGCCGGTTTAATCCCCAATGAAAAAGTACCCAAAGATAAAGTGTGGGATGATGCCACTGTTCAGGCTTTGGTCCAAGCTGTTGCAAAGTTCGAAGATTGGATGCAGGATATCATTTCAGGTGAAATAGTTCCAGAAGGATACATTTTGATGCAAAACAAAATTTTGGGGAAGGATTCTTCTGTATCTCAATCAGAAAGTCTTAAACAGATTTATGATGAGTTCTGCCCCATCTTACTTAACCAGTTTAAGTCAAGGGATCATACAAAGTTTGAGACATTTGATTTAGCCTTGGATGAATACTACAGCAAAATTGAGAGTCAAAGGTCTGAACAACAGCACAAAGCTAAAGAGAACTCGGCTCTTCAGAAACTTAATAAGATACGCAACGATCAGGAAAATCGAGTGCACACTTTGAGGAAAGAAGCTGATAACTGTATTAAAATGGCAGAATTGATAGAATATAACTTAGAAGATGTAGATGCTGCTATATTAGCGGTTCGTGTATCTCTTGCTAAGGGTATGAGTTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCAGTAGCTGGTCTTATTGACAAGCTTCATCTTGAAAGAAATGGCATGACTTTACTGTTGAGCAACAATCTCGATGAAATGGATGATGATGAGAAGACACTCCCTGCAGATAAGGTTGAAGTTGATTTAGCTCTCTCGGCACATGCCAATGCTCGGAGGTGGTATGAACTGAAGAAAAAACAGGAGAGCAAACAGGAAAAGACTATAACTGCCCATGAAAAAGCTTTTAAAGCTGCAGAGAGAAAGACTCGCCTACAGCTTAATCAGGAAAAAACTGTTGCCTCAATTTCACATATGCGCAAAGTTCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAATTATTTGGTTATCAGTGGACGTGATGCCCAGCAAAATGAGATGATAGTAAAGCGTTATATGTCAAAAGGAGATCTGTATGTGCATGCTGAACTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAACCTACGCAGCCAGTTCCGCCGCTGACCCTAAACCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCAAAAATTGTTACCAGTGCTTGGTGGGTCTATCCTCATCAGGTTAGTAAAACTGCTCCTACTGGGGAATATCTGACAGTAGGGAGTTTCATGATACGAGGAAAGAAAAATTATCTTCCACCACACCCCCTTATCATGGGTTTTGGCCTGCTATTTCGCTTGGATGAGAGTTCATTGGGATCACATTTAAATGAAAGGAGAGTAAGAGGAGAGGAGGAAACAGTAGATGATAATGTAGAAACTGGCCCTGTTGAAGAACAATCTGATTCAGATTCTGAGAAGAATGTTGCTGATGGAGAAACTGTTGCAGACTCGGAAAAGAATGGTAATCTATCTGCAGATTCACCCATACCCTCCGAAGACTTGCTTGCAGACACGTCTCAAACTAGTTTGGCTGCAATTAATGCCAAAACTACAGTTTCAGATGATTTTTCTGCAAAAGATACAAGTACAAACAATATGCTTGATAGTGAGAAATTATCCGACTTCAGTGGAAATGGCTTAGCATCTGTCTCCCCTCAGCTTGAGGAAATTCTTGATCGAGCTTTGGGACTTGGATCTGTTGCCAAATCAAATAAAAGTTATGAAGCTGAGAATACTCAGCTTGATTTAAGCAGTGAGAACCATAACGAACCAAGCAAACCTGCAGTAAGGGATAAACCGTATATATCAAAAGCTGAGAGAAGAAAGCTTAAAAATGAACCGAAACATGGAGAAGCACATCCAAGCGATGGACATGGAAAGGACAAATCAAAGTTAAAAGATATTTCTGGTGATCTGCATGCAAAAGATGCTGAAAATTTGAAGACCGGTGGTGGTAAAAAAATCAGCCGTGGACAAAAGGGAAAACTTAAGAAGATAAAGGAGAAGTATGCTGACCAAGACGAGGAAGAAAGGAGCATCCGAATGTCATTATTGGCTTCTTCTGGAAAACCAATCAAGAAGGAAGAGACATTGTCTGTAAATGAAGCCTCGGACAAAGGGAAAAAATCTGACAGTGGTCCTATAGATGCTCCAAAAATATGTTACAAGTGTAAGAAAGTAGGTCATTTATCTCGGGATTGTAAGGAGCAACCAAATGATCTGTTGCACAGTCATGCAACCAGTGAAGCTGAAGAAAATCCAAACATGAGTGCTTCAAACTTGTCATTAGAAGATAGAGTGGCAATGGAAGAAGATGATATTAATGAAATAGGAGAAGAAGAGAAAGAAAAACTGAATGATGTGGATTACCTAACAGGGAATCCACTCCCAAATGACATTCTCTTGTATGCTGTTCCCGTATGTGGTCCATACAATGCAGTTCAATCTTACAAGTATCGAGTGAAGATAATTCCCGGACCTGTGAAGAAAGGGAAAGCTGCAAAAACTGCAATGAACCTATTCAGCCACATGTCAGAAGCAACAAATCGAGAGAAGGAGTTGATGAAAGCCTGTACTGATCCTGAATTAGTTGCTTCAATTGTTGGTAATGTGAAGATAACTGCAGCTGGACTTGCTCAATTGAAGCAAAAACAAAAGAAAGGCAAAAAGAGCAGTGCCAAACAAGGGAATTAG 3411 0.4096 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLTPKTYVFKLMNSSGMTESGESEKVLLLMESGARLHTTVYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIVLFQFGLGENANYVILELYAQGNVILTDSSFTVLTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTTTKLQTALTSSKEDDNDEAVKANGNGTDVSNVEKEKQGSKKGGKSYATLKIILGEALGYGPALSEHMILDAGLIPNEKVPKDKVWDDATVQALVQAVAKFEDWMQDIISGEIVPEGYILMQNKILGKDSSVSQSESLKQIYDEFCPILLNQFKSRDHTKFETFDLALDEYYSKIESQRSEQQHKAKENSALQKLNKIRNDQENRVHTLRKEADNCIKMAELIEYNLEDVDAAILAVRVSLAKGMSWDDLARMVKEEKKAGNPVAGLIDKLHLERNGMTLLLSNNLDEMDDDEKTLPADKVEVDLALSAHANARRWYELKKKQESKQEKTITAHEKAFKAAERKTRLQLNQEKTVASISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHKPTQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNYLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEETVDDNVETGPVEEQSDSDSEKNVADGETVADSEKNGNLSADSPIPSEDLLADTSQTSLAAINAKTTVSDDFSAKDTSTNNMLDSEKLSDFSGNGLASVSPQLEEILDRALGLGSVAKSNKSYEAENTQLDLSSENHNEPSKPAVRDKPYISKAERRKLKNEPKHGEAHPSDGHGKDKSKLKDISGDLHAKDAENLKTGGGKKISRGQKGKLKKIKEKYADQDEEERSIRMSLLASSGKPIKKEETLSVNEASDKGKKSDSGPIDAPKICYKCKKVGHLSRDCKEQPNDLLHSHATSEAEENPNMSASNLSLEDRVAMEEDDINEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYNAVQSYKYRVKIIPGPVKKGKAAKTAMNLFSHMSEATNREKELMKACTDPELVASIVGNVKITAAGLAQLKQKQKKGKKSSAKQGN 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 705 719 - -
Mepo6g01314 1136 Pfam NFACT N-terminal and middle domains 10 161 - -
Mepo6g01314 1136 Pfam NFACT N-terminal and middle domains 221 523 - -
Mepo6g01314 1136 FunFam nuclear export mediator factor Nemf 6 163 - -
Mepo6g01314 1136 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Mepo6g01314 1136 SMART c2hcfinal6 959 975 IPR001878 GO:0003676|GO:0008270
Mepo6g01314 1136 Pfam NFACT protein C-terminal domain 1020 1112 IPR021846 -
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 830 889 - -
Mepo6g01314 1136 Coils Coil 357 384 - -
Mepo6g01314 1136 ProSiteProfiles Zinc finger CCHC-type profile. 960 975 IPR001878 GO:0003676|GO:0008270
Mepo6g01314 1136 Gene3D - 937 983 - -
Mepo6g01314 1136 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 1 1111 - -
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 723 739 - -
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 904 920 - -
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 814 953 - -
Mepo6g01314 1136 SUPERFAMILY Retrovirus zinc finger-like domains 951 978 IPR036875 GO:0003676|GO:0008270
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 814 829 - -
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 682 739 - -
Mepo6g01314 1136 Pfam NFACT protein RNA binding domain 541 652 IPR008532 -
Mepo6g01314 1136 Pfam Zinc knuckle 959 975 IPR001878 GO:0003676|GO:0008270
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 761 783 - -
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 934 952 - -
Mepo6g01314 1136 MobiDBLite consensus disorder prediction 180 214 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01314 K24971 - gmx:100807437 1842.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01314 6 14264017 14273576 Mepo6g01314 6 14264017 14273576 ECH