Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01313 ATGGCCATGGCGTCTGTGGCTCAACAACTGACCAGCACAAAATGGACACCACTTCTATGGAAACCAACAACAACACAAACCCATAAACAAAGACGCCCTGGTATTGTATGTTCCATTGCAATTTCAAGCGCCAATAACAAAGAAAGAGCAAAGCTTAAAGAGCTTTTCGATGATGCTTATGAACGTTGTCGTACTGCTCCAATGGAAGGTGTTTCGTTTACTATTGATCAGTTTACTCAAGCTATTGAAAAATATGATTTTGAGTCTGAAATTGGTACCAAGGTTAGGGGCACTGTGTTTGGCACTGATACTAGTGGAGCTTTTGTTGACATTACTTCAAAGTCCACGGCTTACTTGCCTCTACGAGAGGCGTGCCTCTACAAACTTAGGAATGTAGAAGAAGCTGGCCTATTTCCTGGTGTGAAAGAGGAATTTGTAATTGTTGGTCAAAATGAAATTGATGATGGTATGATCTTGAGTTTAAGAGATATCCAGTCTGAGCTTGCATGGGAAAGGTGTAGACAACTTCAAGCAGAAGATGCTGTTGTCAAGGGTAAGATTGTTGATGCAAATAAAGGTGGTGTGGTGGCTGAAGTTGAAGGCCTTAAGGGATTTGTTCCATTTTCACAGATATCAACGAAAACACCGGGAGAAGAGATTATTGAGATGGAGGTTCCTCTAAAGTTTGTGGAGGTGGACCAGGAACAAGCCAGGCTTATCCTTAGCCACCGCAAAGCCGTCGCTGGCATCCAAGGACAACTAGGAATTGGATCAGTTGTCACCGGCACTGTGCAAAGCCTAAAGCCATATGGTGCCTTTGTCGACATTGGTGGAATCAGTGGCCTCCTTCATGTCAGTCAAATCAGTCATGACCGTATAGCAGATATTGCAACTGTTCTTCAACCTGGTGATACTCTGAAGGTGATGATCTTAAGTCATGACCGGGAGAGAGGTCGTGTAAGTCTTTCCACAAAGAAGTTGGAACCGACACCTGGAGATATGATCCGTAATCCAACACTTGTATTCGAGAAGGCGGAGGAGATGGCTCAGACATTCAGACAGAGAATAGCGCAAGCAGAAGCCATGGCTCGTGCTGATATGCTTAGGTTCCAGCCAGAGAGTGGATTAACTCTCAGCAGCGACGGGATCTTAGGACCACTTGGTTCAGACTTGCCGCCAGAGGGACTGGATCTGATGAGTGAGATACCCGCAGCTGAAGAATAA 1224 0.4502 MAMASVAQQLTSTKWTPLLWKPTTTQTHKQRRPGIVCSIAISSANNKERAKLKELFDDAYERCRTAPMEGVSFTIDQFTQAIEKYDFESEIGTKVRGTVFGTDTSGAFVDITSKSTAYLPLREACLYKLRNVEEAGLFPGVKEEFVIVGQNEIDDGMILSLRDIQSELAWERCRQLQAEDAVVKGKIVDANKGGVVAEVEGLKGFVPFSQISTKTPGEEIIEMEVPLKFVEVDQEQARLILSHRKAVAGIQGQLGIGSVVTGTVQSLKPYGAFVDIGGISGLLHVSQISHDRIADIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSDLPPEGLDLMSEIPAAEE 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01313 407 ProSiteProfiles S1 domain profile. 180 244 IPR003029 GO:0003676
Mepo6g01313 407 SUPERFAMILY Nucleic acid-binding proteins 87 187 IPR012340 -
Mepo6g01313 407 FunFam 30S ribosomal protein S1 76 173 - -
Mepo6g01313 407 SMART S1_6 255 325 IPR022967 -
Mepo6g01313 407 SMART S1_6 178 244 IPR022967 -
Mepo6g01313 407 SMART S1_6 90 162 IPR022967 -
Mepo6g01313 407 FunFam 30S ribosomal protein S1, chloroplastic 174 250 - -
Mepo6g01313 407 Gene3D - 251 329 IPR012340 -
Mepo6g01313 407 Coils Coil 342 362 - -
Mepo6g01313 407 CDD S1_RPS1_repeat_ec2_hs2 180 244 - -
Mepo6g01313 407 PANTHER 30S RIBOSOMAL PROTEIN S1 41 394 - -
Mepo6g01313 407 SUPERFAMILY Nucleic acid-binding proteins 256 335 IPR012340 -
Mepo6g01313 407 Gene3D - 173 250 IPR012340 -
Mepo6g01313 407 ProSiteProfiles S1 domain profile. 92 162 IPR003029 GO:0003676
Mepo6g01313 407 ProSiteProfiles S1 domain profile. 257 325 IPR003029 GO:0003676
Mepo6g01313 407 MobiDBLite consensus disorder prediction 384 407 - -
Mepo6g01313 407 Gene3D - 74 172 IPR012340 -
Mepo6g01313 407 Pfam S1 RNA binding domain 178 244 IPR003029 GO:0003676
Mepo6g01313 407 Pfam S1 RNA binding domain 256 325 IPR003029 GO:0003676
Mepo6g01313 407 FunFam 30S ribosomal protein S1 253 332 - -
Mepo6g01313 407 CDD S1_RPS1_repeat_hs4 257 325 - -
Mepo6g01313 407 SUPERFAMILY Nucleic acid-binding proteins 175 247 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01313 K02945 - gmx:100806905 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01313 6 14250558 14254560 Mepo6g01313 6 14250558 14254560 ECH