Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01067 ATGGGGATTGTCTCTCAGGATGCCCTTAACCAGCTACAGGCTCTCATAGATCAAGTTGAAGAGCCACTTCAGAAAACATTTCAGAATGTTCATCAAGGACATGTAACTGAAACGTTGATTCGGTTTCTGAAAGCAAGAGAATGGAATGCTTCAAAGGCGCATAAAATGTTGATTGATAGTTTGAACTGGAGGGTACAAAATGAGATTGACAAAATATTATCGAAACCAATAATCCCTCCGGATCTATATAGAGGTGTGCGCGATTCTCAACTCATAGGATTGTCAGGGTACTCAAGAGAGGGCCTGCCTGTCTTTGCAATCGGTGTTGGGCTTAGTACATTCGACAAAGCATCTGTCCATTATTATGTTCAGTCTCACATTCAAATTAATGAGTATCGTGATCGTGTAATCTTGCCTTCTGCATCGAAGAAGAATGGTCGCCCTATTACAACATGTGTGAAGGTTTTGGATATGACTGGTCTGAAGTTATCAGCCCTGAATCAGATTAAGTTATTAACAATAATATCGTCCATTGATGATCTGAACTACCCTGAGAAGACAAATACTTATTACATTGTAAATGCCCCATACATATTTTCAGGTTGTTGGAAGGTTGTGAAGCCACTTTTACAAGAGAGGACTAGAAAAAAAGTGCAAGTCTTACAAGGCTGTGGGCGAGATGAGCTGCTGAAGATCATGGATTACGCATCTCTACCACATTTCTGTAAAAAAGAAGGTTCTGGATCATCCAAACATTCAGGTAGTGGGAGTGAAAATTGCTATTCCTTGGATCACCCCTTCCATCAAGAACTCTACAACTACATCAAGGAACAATCCAGAATGAATGATGATAGGAAACCAATCAAGCACGGATCTTTCCATGTAGAATTTCCTGAAACTGCTGCCGATGATGGAGAAATTGCCAAGACTATAGAGTCAGAGATACACAAGTTTGAGAACAGCCATGGGAATGTGATTGATGGTTGA 987 0.4043 MGIVSQDALNQLQALIDQVEEPLQKTFQNVHQGHVTETLIRFLKAREWNASKAHKMLIDSLNWRVQNEIDKILSKPIIPPDLYRGVRDSQLIGLSGYSREGLPVFAIGVGLSTFDKASVHYYVQSHIQINEYRDRVILPSASKKNGRPITTCVKVLDMTGLKLSALNQIKLLTIISSIDDLNYPEKTNTYYIVNAPYIFSGCWKVVKPLLQERTRKKVQVLQGCGRDELLKIMDYASLPHFCKKEGSGSSKHSGSGSENCYSLDHPFHQELYNYIKEQSRMNDDRKPIKHGSFHVEFPETAADDGEIAKTIESEIHKFENSHGNVIDG 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01067 328 SUPERFAMILY CRAL/TRIO N-terminal domain 13 76 IPR036273 -
Mepo6g01067 328 Pfam CRAL/TRIO domain 90 241 IPR001251 -
Mepo6g01067 328 CDD SEC14 83 241 IPR001251 -
Mepo6g01067 328 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Mepo6g01067 328 SMART sec14_4 79 247 IPR001251 -
Mepo6g01067 328 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 79 239 IPR001251 -
Mepo6g01067 328 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 323 - -
Mepo6g01067 328 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Mepo6g01067 328 SUPERFAMILY CRAL/TRIO domain 81 278 IPR036865 -
Mepo6g01067 328 Gene3D - 4 289 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01067 Mepo-Chr6 11265734 11270515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01067 1 323 Acyl Lipid Metabolism Gene Families AT5G47730 74.613 0.0 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01067 K26544 - gmx:100793867 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01067 6 11265734 11270515 Mepo6g01067 6 11265734 11270515 ECH