Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00946 ATGACATCATCATCATCACTGGGCGGCGCAGCGGCGTCGCTAAAGGCGGTGCTTGATCGCGTCCACCACGCCGCCGAGAGAACAAGCCGAGATGTGAAAGAAATCCGGGTGGTGGCGGCGAGTAAGACGAAGTCAGTTTCTATGCTCCGGCAGGTGTATGACGCCGGACATCGTTGCTTCGGTGAGAATTACGTTCAGGAAATAATTGAGAAAGCTCCTCAGCTTCCCGAAGATATTGAGTGGCATTTTATTGGGAATTTGCAGAGTAATAAAGTTAAACCTCTTCTTGCTGGTGTTCCCAACCTTGCTTATGTAGAGAGTGTAGACGATGAAAAGATAGCAAACCTTCTTGATCGCGCCATAGCCAAAATTGACAGGAAACCATTGAAAGTTTTTGTTGAAGTGAATACAAGCGGAGAAACATCTAAATTTGGCGTTGAACCAGCACTGTGTCTAGACCTTGTAAAACATATTGTTACAAATTGCCCAAACCTTGAATTTTGTGGCCTAATGACAATTGGCATGCTGGATTATTCATCTACCCCAGAAAATTTTAAGACATTATCCAAATGTAGAAGTGAAGTTTGTGCGGCACTTGGAACATCAGAAGCACAATGTGAGCTGTCAATGGGAATGACTGCAGACTTTGAGCAAGCTATTGAGATGGGAAGCACAACTGTTAGGATTGGAACCGCAATATTTGGGGCCAGAGAGTATCCACTGAAAGAAGAGAAGTAA 738 0.4458 MTSSSSLGGAAASLKAVLDRVHHAAERTSRDVKEIRVVAASKTKSVSMLRQVYDAGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLAGVPNLAYVESVDDEKIANLLDRAIAKIDRKPLKVFVEVNTSGETSKFGVEPALCLDLVKHIVTNCPNLEFCGLMTIGMLDYSSTPENFKTLSKCRSEVCAALGTSEAQCELSMGMTADFEQAIEMGSTTVRIGTAIFGAREYPLKEEK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00946 245 CDD PLPDE_III_YBL036c_euk 14 235 - -
Mepo6g00946 245 ProSitePatterns Uncharacterized protein family UPF0001 signature. 81 95 IPR011078 GO:0030170
Mepo6g00946 245 Gene3D Alanine racemase 3 244 IPR029066 -
Mepo6g00946 245 SUPERFAMILY PLP-binding barrel 10 235 IPR029066 -
Mepo6g00946 245 PIRSF YBL036c_PLPDEIII 1 243 IPR011078 GO:0030170
Mepo6g00946 245 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 8 242 IPR011078 GO:0030170
Mepo6g00946 245 Pfam Alanine racemase, N-terminal domain 18 237 IPR001608 -
Mepo6g00946 245 Hamap Pyridoxal phosphate homeostasis protein. 12 236 IPR011078 GO:0030170
Mepo6g00946 245 FunFam Pyridoxal phosphate homeostasis protein 2 244 - -
Mepo6g00946 245 NCBIfam YggS family pyridoxal phosphate-dependent enzyme 14 237 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00946 Mepo-Chr6 9912516 9914954 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00946 K06997 - gmx:100527295 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00946 6 9912516 9914954 Mepo6g00946 6 9912516 9914954 ECH