Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00937 ATGGGAAACAAGTTGAATGTGGTGGTGTTGTGTTTGTGTTTGTGGACCCTATTGTTTTCTCTTGTTTCCTGTGCACCAAATGAAGGGTTGCGTAGGATTGGTTTGAAAAAGAACAAATTGGAACCCAAAAACTTGTTGGGGTCAAAGGGCTGTGAATCATCATGGTCTTCCATTAGGAAGTATGGTTCCAAAAACATCCTTGGGGGAGCTGGGGAAGCTGATGTTGTTGCATTGAAGAATTACTTGGATGCTCAGTACTATGGTGAAATATCCATTGGTACTCCTCCTCAGACATTTACTGTGATTTTCGATACTGGTAGCTCTAATACTTGGGTGCCATCAGTTAAATGTTACTTCTCGCTTGCATGCTTAGTCCATGCTAAGTACAGGTCTAGCCAGTCAAGTACCTACAAGCCAAATGGGACTCATGCTGCAATTCAGTATGGTACTGGAGCAGTTTCTGGCTTCTTTAGCTACGACAATGTAAAAGTTGGCGATGTAGTTGTGAAGGACGTGGAATTTATTGAAGCAACTAGAGAGCCTGGACTTACATTTGTCGCGGCTAAGTTTGATGGTTTGCTTGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGTCCCAATATGGTACAAAATGGTTAAACAAGGTCTTGTTAAGGATCCTGTATTTTCATTTTGGCTCAATCGTAATCCAAATGAGGAGCAAGGAGGTGAGCTTGTTTTTGGTGGTGTTGATCCTGCTCACTTCAAGGGTGAACATACTTACGTGCCTGTGACGCGAAAAGGATATTGGCAGTTTGCAATGGGAGATGTACTTATTGATGGAAAACCCACTGGATATTGTGCTAATGATTGTTCAGCAATAGCAGACTCAGGGACGTCTTTGTTGGCAGGTCCAACGACTGTAATTACTATGATAAACCAAGCAATTGGAGCATCTGGAGTTTACAGTCAAGAATGCAGGACTGTTGTTGATCAATATGGACATTCAATTTTGCAACTGCTCGTGGCTGAAGCACAGCCAAAAAAGGTCTGCTCCCAAATTGGGCTGTGCACATTTGATGGCACTCACGGTGTTAGTATGGGTATCCAGAGTGTGGTGGAACAGACCGATAGAATATCATCCGGTGGTCATCAAGATGCTACTTGTTCTGTATGCGAGATGGCTGTTGTCTGGATGCAGAATCAGCTGAAGCAGAATCAAACAGAAGAGCGGATAATAAACTACGCCGATTCGCTTTGTGACAAAATGCCTAACCCATTGGGACAATCATCTGTTGATTGTGCAAAGATCTCTTCCATGCCTAAAGTTTCCTTCACCATTGGTGGCAAAAAATTTGACCTTGCCCCAGAAGAGTACATATTGAAGGTGGGTGAAGGTGCTGCAGCCCAATGCATTAGTGGCTTTACTGCTTTGGATGTTCCTCCTCCACGTGGCCCACTCTGGATCCTTGGAGATATCTTCATGGGGCGCTATCATACAGTCTTTGACTATGGTAAACTCAGAGTTGGATTTGCCGAAGCAGCATAG 1533 0.4364 MGNKLNVVVLCLCLWTLLFSLVSCAPNEGLRRIGLKKNKLEPKNLLGSKGCESSWSSIRKYGSKNILGGAGEADVVALKNYLDAQYYGEISIGTPPQTFTVIFDTGSSNTWVPSVKCYFSLACLVHAKYRSSQSSTYKPNGTHAAIQYGTGAVSGFFSYDNVKVGDVVVKDVEFIEATREPGLTFVAAKFDGLLGLGFQEISVGNAVPIWYKMVKQGLVKDPVFSFWLNRNPNEEQGGELVFGGVDPAHFKGEHTYVPVTRKGYWQFAMGDVLIDGKPTGYCANDCSAIADSGTSLLAGPTTVITMINQAIGASGVYSQECRTVVDQYGHSILQLLVAEAQPKKVCSQIGLCTFDGTHGVSMGIQSVVEQTDRISSGGHQDATCSVCEMAVVWMQNQLKQNQTEERIINYADSLCDKMPNPLGQSSVDCAKISSMPKVSFTIGGKKFDLAPEEYILKVGEGAAAQCISGFTALDVPPPRGPLWILGDIFMGRYHTVFDYGKLRVGFAEAA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00937 510 Pfam Saposin-like type B, region 2 319 352 IPR008138 -
Mepo6g00937 510 ProSiteProfiles Peptidase family A1 domain profile. 86 507 IPR033121 -
Mepo6g00937 510 Pfam Eukaryotic aspartyl protease 85 509 IPR033121 -
Mepo6g00937 510 SUPERFAMILY Acid proteases 11 509 IPR021109 -
Mepo6g00937 510 Gene3D Acid Proteases 31 244 IPR021109 -
Mepo6g00937 510 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Mepo6g00937 510 Pfam Saposin-like type B, region 1 383 419 IPR007856 GO:0006629
Mepo6g00937 510 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 288 299 IPR001969 GO:0004190|GO:0006508
Mepo6g00937 510 CDD phytepsin 76 508 IPR033869 GO:0004190
Mepo6g00937 510 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 19 508 IPR001461 GO:0004190|GO:0006508
Mepo6g00937 510 Gene3D - 316 419 - -
Mepo6g00937 510 SUPERFAMILY Saposin 316 419 IPR011001 -
Mepo6g00937 510 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 101 112 IPR001969 GO:0004190|GO:0006508
Mepo6g00937 510 PRINTS Pepsin (A1) aspartic protease family signature 483 498 IPR001461 GO:0004190|GO:0006508
Mepo6g00937 510 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Mepo6g00937 510 PRINTS Pepsin (A1) aspartic protease family signature 238 251 IPR001461 GO:0004190|GO:0006508
Mepo6g00937 510 PRINTS Pepsin (A1) aspartic protease family signature 288 299 IPR001461 GO:0004190|GO:0006508
Mepo6g00937 510 FunFam Aspartic proteinase A1 316 419 - -
Mepo6g00937 510 ProSiteProfiles Saposin B type domain profile. 380 421 IPR008139 -
Mepo6g00937 510 Gene3D Acid Proteases 245 510 IPR021109 -
Mepo6g00937 510 ProSiteProfiles Saposin B type domain profile. 316 356 IPR008139 -
Mepo6g00937 510 SMART sapb_4 280 352 IPR008139 -
Mepo6g00937 510 SMART sapb_4 382 466 IPR008139 -
Mepo6g00937 510 FunFam Vacuolar aspartic proteinase 372 509 - -
Mepo6g00937 510 FunFam Lysosomal aspartic protease 71 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00937 Mepo-Chr6 9806927 9811784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00937 K08245 - gmx:100801598 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00937 6 9806927 9811784 Mepo6g00937 6 9806927 9811784 ECH