Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00430 ATGGAAGCTCAGATGACTGATTCTGACTGGGAGTCTTCCAGTGAGAGCAGCGGCAGTGATGATCAAGAGGATATTGATTTTCTCTATGGTGGCCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATCGGTAGGATAAATGATTTCCTCTCATTCGAGAGAACATTTGCTTACGGCGATGTCGTGTGCTCCTTGTCAGACCCGTCTGGACAGATGGGGAGGGTCGTAAGTGTTGACATGTTAGTGGATTTGGAAAACATTCAAGGAAATGTATTAAAAAATGTGAACTCCAAGAAACTTCTGAAGATTCGTTCCACTTCGGAAGGTGATTGCGTAATTAAAGGGCCATGGCTTGGTCAGGTTCAAAGGGTGGTGGACAGATTAAGTGTATTGTTTGATGACGGGACTAAGTACGAGATCACTACATTGGAAAATGATAAGATTGTACCACAAAATCCTAATTTTCTTGAAGATTCACAGTATCCATACTATCCAGGGCAGAGAGTGAAGGTTAAGTCCTCGACCGCTTCCAAATCAGCTAGATGGCTATGTGACAATTGGAGAGACAATCATGATGAAGGAACTGTTTGTTCTGTGGAAGCAGGTTTGGTGTATGTTAATTGGCTTGCCTCGGTTCCTTTAGGTTCTAATTCAAATGTGAATACTCCTCCATGCTGGCAAGATTCCAAAAACTTGACCTTACTGTCATGTTTTTCGCATGCAAACTGGCAACTTGGTGACTGGTGTATGCTTCCAGTTGCAGACCAAAAGGAACAAGTTGAACAGATGATTCGAGATTCATCTGATAGTTATCTTCCTAATAAGCATAGTATGGCTAGAGAATGTAGGAGAAGAAACCTCAACTCTAGCATGGATGAATTGTTTATAATTGGGAAGATAAAGACCAAAGTTGATATTATATGGCAAAATGGGGAACATACTTTGGGCTCAGATCCGCAGAATTTAGTTCCTGTGAATGTCATAAACACTCATGAATTTTGGCCTCATCAGTTTGTGATGGAAAAAGGTACTTCTGATGATGATAAGTCTAGCAATCAAAGATGGGGTGTCATTCTATCGGTTGATGCAAAAGAGCATACGGTAAACGTACAATGGAGAACAGCTCCCACATCCAAGCCAGATGATTTGGCTGGAGAACCAACGACGGAAACTGTGAGTGCCTACGAACTTGTTGAGCACCCAGATTTTTCCTGTTGTTTTGGCGATATTGTGTTCAAGGCGGCTCAAAAACAGCCCGATTACCTAGCTGAAAAATACAATGCAAATTCAATGAGTGACTTGAATGTGGAAGCTCCTCTGAAAAACCTGTACCAAATCAGTTATCCGAATAACTCGGTAGGTAACTGTCACCTGTCCTGTATTGGCAATGTTACTGGTTTCAAAGATGGTCATGTGGAGGTGAAATGGGCTACTGGTTTAATGACCAAGGTTGCGCCCTATGAAATATTTCGGATTGGTAAACATGAAGCTTCGACTGCAACTCCTGTTTCTTATGAAACAAATATTGAGGAGTTGGCTGAAGAGATTACTGAACATGGAAGTCTACCTTCTGACCAGAAGGGAAAGGGCTTGTCAGATTGTAACAATGATAGAGATAAATGTGAAAAGCATCAAGGAGAGAGTAGTTTGTTTTCCCTGCCTCAAGCTGCCCTTGAACTTTTCTCTAGCATTAAAGCCGGCATTTTCCAAAAACTTGGCATGACATCATTTTATGGAGCTGTTTCCACAGTCCCTACATTTGAAGAGGGAAATGCGCCCGATTTTCTCGACAAGAAAGATTTGGAAACTTGTGGCCCTGAGACTGATTCACATCCTGCGAGCAGGTTGAAGTCTACTGAAGACTCAACTCCGTATTGTGAAGTTATTAGGATTCGTGAGAGGAGCGATGCTCCAGTTTCTTCAGACAGCAATAGTTCGGATCAGTTGAAGCGGTTTGATGTAATTGATACTTGTTCAGATCACCACTTTTTCAATGAGAGAAAAGGGTTGCCGATATCTCAGGTTAAGAAAGATTGGGCAAAAAAGGTACAGCAAGAATGGAGCATCCTGGAGAAAAACCTTCCTGAAACTATTTATGTCCGTGTTTTCGAAGAAAGAATGGATCTCATGCGAGCAGCCATTGTTGGTGCGTCAGGGACACCTTATCACGACGGGTTGTTTTTCTTCGATATATGTTTCCCTCCCGAGTATCCCAATGAACCACCTATGGTGCACTACATTTCTGGTGGATTAAGAATAAATCCTAATTTGTACGAGTCGGGCAAAGTGTGTCTGAGTCTCCTAAATACATGGACTGGTACCGCGACTGAAGTGTGGAACCCTGGAGCTTCCACAGTTCTTCAAGTCCTTCTCTCTCTGCAGGCTCTTGTCCTTAACGAAAAGCCTTATTTCAATGAAGCTGGATATGACCAACAAATTGGTAGAGCTGAAGGAGAGAAAAACTCTATTAGTTACAATGAGAATGCTTTCCTCCTCACCTGCAAATCCATGTTGGGTCTACTAAGAAAGCCGCCGGAGCATTTTGAGGCATTGGTGGAAGAACACTTTCGACAACGCTCAAAACATATACTCGTTGCTTGTAAGGCATATCTTGAAGGAGCTCCTATTGGAGGTGAAAAAAGTGAGCATGAAAACCGAAATGGAACTTCTACAGGATTCAAAATTATGCTTTCTAAACTCTTCCCTAAGCTTGTTGAGGCATTTTCTGATAAGGGAATTGACTGCTCCCAGTTTGTTGACATGCAAAAGTGA 2775 0.4216 MEAQMTDSDWESSSESSGSDDQEDIDFLYGGQAQSILSSLEESIGRINDFLSFERTFAYGDVVCSLSDPSGQMGRVVSVDMLVDLENIQGNVLKNVNSKKLLKIRSTSEGDCVIKGPWLGQVQRVVDRLSVLFDDGTKYEITTLENDKIVPQNPNFLEDSQYPYYPGQRVKVKSSTASKSARWLCDNWRDNHDEGTVCSVEAGLVYVNWLASVPLGSNSNVNTPPCWQDSKNLTLLSCFSHANWQLGDWCMLPVADQKEQVEQMIRDSSDSYLPNKHSMARECRRRNLNSSMDELFIIGKIKTKVDIIWQNGEHTLGSDPQNLVPVNVINTHEFWPHQFVMEKGTSDDDKSSNQRWGVILSVDAKEHTVNVQWRTAPTSKPDDLAGEPTTETVSAYELVEHPDFSCCFGDIVFKAAQKQPDYLAEKYNANSMSDLNVEAPLKNLYQISYPNNSVGNCHLSCIGNVTGFKDGHVEVKWATGLMTKVAPYEIFRIGKHEASTATPVSYETNIEELAEEITEHGSLPSDQKGKGLSDCNNDRDKCEKHQGESSLFSLPQAALELFSSIKAGIFQKLGMTSFYGAVSTVPTFEEGNAPDFLDKKDLETCGPETDSHPASRLKSTEDSTPYCEVIRIRERSDAPVSSDSNSSDQLKRFDVIDTCSDHHFFNERKGLPISQVKKDWAKKVQQEWSILEKNLPETIYVRVFEERMDLMRAAIVGASGTPYHDGLFFFDICFPPEYPNEPPMVHYISGGLRINPNLYESGKVCLSLLNTWTGTATEVWNPGASTVLQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSISYNENAFLLTCKSMLGLLRKPPEHFEALVEEHFRQRSKHILVACKAYLEGAPIGGEKSEHENRNGTSTGFKIMLSKLFPKLVEAFSDKGIDCSQFVDMQK 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00430 924 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 679 839 IPR000608 -
Mepo6g00430 924 SMART ubc_7 682 839 - -
Mepo6g00430 924 Pfam Ubiquitin-conjugating enzyme 684 830 IPR000608 -
Mepo6g00430 924 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 5 916 - -
Mepo6g00430 924 FunFam Probable ubiquitin-conjugating enzyme E2 23 640 913 - -
Mepo6g00430 924 SUPERFAMILY UBC-like 674 847 IPR016135 -
Mepo6g00430 924 Gene3D Ubiquitin Conjugating Enzyme 642 916 IPR016135 -
Mepo6g00430 924 CDD UBCc 682 834 IPR000608 -
Mepo6g00430 924 MobiDBLite consensus disorder prediction 519 540 - -
Mepo6g00430 924 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00430 Mepo-Chr6 4368509 4374882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00430 21 918 Miscellaneous Gene Families AT2G33770 49.944 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00430 K10581 - gmx:100805463 1389.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00430 6 4368509 4374882 Mepo6g00430 6 4368509 4374882 ECH