Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00327 ATGGCATCGAGTTCCAAGAAGAATGGTGGATCGGTTGTTTTTGAGGACTACTTCCCTTCAATGATGGAGAAATTGGGAAGTGAAGGGTTTATGAAGGAGTTGGCAAATGGTTTTAATGTGTTAATGGACAGAGAAAAGAAAGTGATAACATTTGAGAGCTTGAAGAAAAACTCTGCATTGCTTGGGTTGGAAGGTATGAACGATGATGAGATTAATTGCATGCTAAGAGAAGGTGATCTTGATGGAGATGGAGCTCTTAATGAGATGGAGTTTTGCACCCTCATGTTTAGGTTGAGTCCTGCTTTGATGAATGACTCTAAACAACTTTTGGAAGAAGCTATTTTCACTGGCCATTGA 357 0.3978 MASSSKKNGGSVVFEDYFPSMMEKLGSEGFMKELANGFNVLMDREKKVITFESLKKNSALLGLEGMNDDEINCMLREGDLDGDGALNEMEFCTLMFRLSPALMNDSKQLLEEAIFTGH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00327 118 Gene3D - 12 117 - -
Mepo6g00327 118 Pfam EF-hand domain pair 45 97 IPR002048 GO:0005509
Mepo6g00327 118 ProSitePatterns EF-hand calcium-binding domain. 79 91 IPR018247 -
Mepo6g00327 118 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Mepo6g00327 118 SUPERFAMILY EF-hand 6 95 IPR011992 -
Mepo6g00327 118 PANTHER CALCIUM-BINDING PROTEIN KIC 12 114 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00327 Mepo-Chr6 3409277 3409763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00327 14 114 EF-hand Containing Proteins AT4G27280 58.824 1.22e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00327 K24345 - gmx:100306210 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00327 6 3409277 3409763 Mepo6g00327 6 3409277 3409763 ECH