Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00211 ATGGCTTCTACTTTGAATCTCTCTTCTTGTTCTTCCTCACCTCTCCTCTCTTGTCCACGGCCATCCAATCACTTCAAATTGTTCAATGATTTCCCTCTTCTCAAAGTGAATTATAAATCTACTTCAACTCACAATGCTGCTTTTAGAGTTAAATCTGCATTGACATCTAGAGGGGGTGACCTACTTTCGTATCCGAAAAACACCAATGATATTATCATTGGCAAAGATCTCGTTGTTGGTGCTGAATCTATTCTTATTAAGGAACAGTCTAATGGAACACCGGCATCAGACTCAGGGTTACCAAGCTCTTTTTTCTCTGCTGACTACAATGACTATGATTTGGACATCCCTGCAGAAGGTTTTTCTTCTATCCCTGAGGCCATCGAAGACATTCGCCAAGGAAAGATGGTAGTGGTTGTAGACGATGAAGATAGAGAAAATGAAGGAGACTTGATAATGGCAGCAGAATTGGCAACGCCCGAAGCTATGGCTTTTATAGTAAAGCATGGAACTGGCATAGTTTGTGTAAGCATGAATGAAGAAGATCTTGATAGATTGGAGCTTCCTTTGATGGTGGACAGCAAGGCTAATGCTGATAAACTTCGTACCGCATTCACTGTGACCGTGGATGCTAAACATGGTACCACCACAGGGGTGTCAGCTCAAGATAGGGCAACTACAGTATTGGCCCTTGCATCTAGAGATTCAACTCCAGCTGATTTCAACCGACCAGGCCATATTTTCCCACTAAAATACAGGGAAGGTGGTGTCTTGAAGAGAGCTGGACATACAGAAGCTTCAGCTGATCTTACCATACTTGCTGGTTTGGAGCCAGTGGCAGTTCTGTGTGAGATTGTAGATGATGACGGTTCCATGGCTAGATTACCTAAGCTCCGCGAATTTGCCAAGCGTGAGAATTTGAAAATTGTATCTATCGCTGACTTGATAAGATATAGAAGAAAGAGAGATCAATTAGTGGAACGTTCTTCTGCTGCAAGAATACCTACAATGTGGGGGCCATTCACATCATACTGTTATAAGTCTCTGTTAGACGGGATTGAGCATATTGCAATGGTTAAGGGTGACATTGGAGATGGAGAAGATGTTCTTGTGAGGGTACACTCAGAGTGTCTAACTGGAGACATATTTGGATCTGCCCGATGTGACTGTGGAAATCAGCTTGCACTTGCAATGGAACAGATTGAGGCTGCCGGTAGGGGAGTGCTTGTATATCTACGCGGACATGAAGGAAGGGGTATTGGATTGGGCCACAAGCTCCGTGCTTATAACTTACAGGATGATGGACGCGATACTGTAGAAGCCAATGAGGAGTTGGGATTGCCTGTTGACTCTAGGGAATATGGCATAGGCGCACAGATACTGAGGGATCTAGGCGTTAAATCTATGAAGTTGATGACAAACAATCCAACAAAATATGTTGGCCTCAAAGGCTATGGTTTGACTGTTTCTGGTAGGATCCCATTGTTAACTCTTATCACCTCCGAGAACAAGAGATACTTGGAGACCAAACGTGTGAAAATGGGCCACGTCTATGGCATGGAACTTAACAACGGCAGTGGCAAAACCAATACTGTTGAAGAATCAAATGTTGTTGCTGGCTTTTGA 1626 0.436 MASTLNLSSCSSSPLLSCPRPSNHFKLFNDFPLLKVNYKSTSTHNAAFRVKSALTSRGGDLLSYPKNTNDIIIGKDLVVGAESILIKEQSNGTPASDSGLPSSFFSADYNDYDLDIPAEGFSSIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAELATPEAMAFIVKHGTGIVCVSMNEEDLDRLELPLMVDSKANADKLRTAFTVTVDAKHGTTTGVSAQDRATTVLALASRDSTPADFNRPGHIFPLKYREGGVLKRAGHTEASADLTILAGLEPVAVLCEIVDDDGSMARLPKLREFAKRENLKIVSIADLIRYRRKRDQLVERSSAARIPTMWGPFTSYCYKSLLDGIEHIAMVKGDIGDGEDVLVRVHSECLTGDIFGSARCDCGNQLALAMEQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVKSMKLMTNNPTKYVGLKGYGLTVSGRIPLLTLITSENKRYLETKRVKMGHVYGMELNNGSGKTNTVEESNVVAGF 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00211 541 NCBIfam GTP cyclohydrolase II 328 517 IPR000926 GO:0003935|GO:0009231
Mepo6g00211 541 SUPERFAMILY YrdC/RibB 121 322 IPR017945 -
Mepo6g00211 541 CDD GTP_cyclohydro2 325 516 IPR000926 GO:0003935|GO:0009231
Mepo6g00211 541 SUPERFAMILY RibA-like 324 495 IPR036144 -
Mepo6g00211 541 Gene3D GTP cyclohydrolase II 326 497 IPR036144 -
Mepo6g00211 541 FunFam Riboflavin biosynthesis protein RibBA 326 497 - -
Mepo6g00211 541 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 120 516 IPR016299 GO:0009231
Mepo6g00211 541 Gene3D DHBP synthase 112 325 - -
Mepo6g00211 541 PANTHER GTP CYCLOHYDROLASE II-RELATED 119 519 - -
Mepo6g00211 541 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 126 318 IPR000422 GO:0008686|GO:0009231
Mepo6g00211 541 Hamap GTP cyclohydrolase-2 [ribA]. 324 520 IPR000926 GO:0003935|GO:0009231
Mepo6g00211 541 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 122 319 IPR000422 GO:0008686|GO:0009231
Mepo6g00211 541 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 119 323 IPR000422 GO:0008686|GO:0009231
Mepo6g00211 541 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 112 325 - -
Mepo6g00211 541 Pfam GTP cyclohydrolase II 330 494 IPR032677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00211 Mepo-Chr6 2071525 2076052 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00211 K14652 - gmx:100801046 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03493 2 44482632 44488088 Mepo6g00211 6 2071525 2076052 PCT