Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04015 ATGTCACAAGTTGTAGCCACACGATCCATCCAAACCACACTCCCCACTACAAGATCTACACGTGAAAGAGTTCAGAAGCTGTTGAAACCACCAACTTTTGCTTCAAAAGTGTTCCAACAAAGAGGGAACAAGTGCTGTAGATTGGTGTTCAGAAGCTCTTCTATCAGTGCAAGGAAATCAGCTCCTGCTGAAGTTGTTCCTGTTTCACCTGAAGATGATTCAAAGATTCAGGAGCAGTTGCAACGTTTACATGGGGTGCAGCCATTTGGTGATGCTTTAAATGGAAATGGAATGTGGTCGAAGCCTACGTTTAAGCGTAAGACAAAGATAGTATGTACTATTGGACCATCTACCGATACTAAGGAAATGATTTGGAAGTTGGCTGAGGCTGGTATGAATGTTGCTCGTCTCAATATGTCTCACGGTGATCATGCTTCTCATCAAAAAGTTATTGACTTGGTTAAAGAATATAATGCACAATCTAAGGACAATGTTATTGCAATTATGCTTGACACTAAGGGTCCTGAGGTTAGAAGTGGGGATTTGCCCCAACCAATCAATTTGACAACTGGGCAAGAATTCACTTTTACTATTCAGAGAGGTGTCGGAACTGCAGACTGTGTCAGTGTAAACTATGATGATTTTGTCAATGATGTAGCAGTGGGGGATATGATTCTTGTTGATGGCGGTATGATGTCTATGTTGGTTAAGTCTAAGACGGAGAATTCAGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGGAGACATTTGAACGTTAGAGGAAAAAGTGCAACGTTGCCTTCAATAACTGAGAAGGATTGGGATGATATCAAATTCGGAGTGGATAACAAAGTTGATTTCTATGCTGTTTCCTTTGTTAAGGATGCCGAAGTTGTTCATGAACTGAAGAATTATTTGAAGAGCTGTAATGCTGATATACATGTCATCGTAAAAATTGAAAGTGCCGATTCTATACCAAATTTGAATTCAATCATCACTGCATCTGATGGGGCTATGGTTGCCCGAGGAGACCTTGGTGCTGAGCTCCCTATCGAAGAGGTTCCTCTTTTGCAGGAAGAGATAATCAACTTGTGCCGTAGCATGGGAAAGGCTGTGATTGTTGCAACGAATATGCTGGAAAGCATGATTGTTCACCCAACTCCAACTAGAGCTGAAGTATCAGATATAGCTATTGCTGTTCGAGAAGGTTCAGATGGAATAATGCTGTCCGGAGAAACTGCTCATGGAAAGTTTCCTCTAAAAGCTGTGAAAGTGATGCACACAGTAGCGTTACGGACAGAAGCTACTATACCAGGTGGTCAAATGCCACCTAATATTGGTCAAGTGTTCAAGAATCACATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCTAACACCCTTGGAACCTCTACTGTTGTATTCACTCGAACCGGTTTCATGGCTGTCTTGTTGAGCCACTATCGTCCTTCTGGCACAATATTTGCTTTCACAGACGAGAAGAGAGTACAACAAAGACTGGCTTTGTATCAAGGAGTTACTCCTGTATACATGGAATTCAGCGATGATTCTGAAGAAACTTTTAGAAGAGCCTTGGATTTTCTACAGAAGCAAGGAATGGTGAAGATAGGAGAAGAAGTTGCACTTGTACAAAGTGGTAGGCAACCCATATGGAGGTTCCAATCCACTCACAATATCCAAGTTAGGAAAGTTCAATAA 1731 0.4159 MSQVVATRSIQTTLPTTRSTRERVQKLLKPPTFASKVFQQRGNKCCRLVFRSSSISARKSAPAEVVPVSPEDDSKIQEQLQRLHGVQPFGDALNGNGMWSKPTFKRKTKIVCTIGPSTDTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPINLTTGQEFTFTIQRGVGTADCVSVNYDDFVNDVAVGDMILVDGGMMSMLVKSKTENSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKSCNADIHVIVKIESADSIPNLNSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAVLLSHYRPSGTIFAFTDEKRVQQRLALYQGVTPVYMEFSDDSEETFRRALDFLQKQGMVKIGEEVALVQSGRQPIWRFQSTHNIQVRKVQ 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04015 576 FunFam Pyruvate kinase 176 269 - -
Mepo5g04015 576 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 98 440 IPR015813 GO:0003824
Mepo5g04015 576 PANTHER PYRUVATE KINASE 97 553 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 Gene3D - 448 576 IPR036918 -
Mepo5g04015 576 Pfam Pyruvate kinase, barrel domain 106 441 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 FunFam Pyruvate kinase 271 436 - -
Mepo5g04015 576 Pfam Pyruvate kinase, alpha/beta domain 463 555 IPR015795 -
Mepo5g04015 576 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Mepo5g04015 576 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 Gene3D - 108 433 IPR040442 -
Mepo5g04015 576 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Mepo5g04015 576 SUPERFAMILY PK C-terminal domain-like 424 575 IPR036918 -
Mepo5g04015 576 NCBIfam pyruvate kinase 106 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mepo5g04015 576 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Mepo5g04015 576 FunFam Pyruvate kinase 437 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04015 Mepo-Chr5 50175091 50183359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04015 K00873 - gmx:100815822 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04015 5 50175091 50183359 Mepo5g04015 5 50175091 50183359 ECH
Mepo5g04015 5 50175091 50183359 Mepo4g04180 4 51722839 51727939 PCT